RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.15■□□□□ 0.18
EPHB3-201ENST00000330394 NEK11Q8NG66 645 aa16.15■□□□□ 0.18
EPHB3-201ENST00000330394 GIMAP7Q8NHV1 300 aa16.15■□□□□ 0.18
EPHB3-201ENST00000330394 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
EPHB3-201ENST00000330394 TTC41PQ6P2S7 1318 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 SPA17Q15506 151 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 IQCEQ6IPM2 695 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 WASF1Q92558 559 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 RABEP2Q9H5N1 569 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 ATP2B3Q16720 1220 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 MICALL1Q8N3F8 863 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 PLEKHF1Q96S99 279 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.17
EPHB3-201ENST00000330394 ZNF569Q5MCW4 686 aa16.14■□□□□ 0.17
EPHB3-201ENST00000330394 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 YEATS4O95619 227 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 EYA1Q99502 592 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 BCCIPQ9P287 314 aaKnown RBP eCLIP16.13■□□□□ 0.17
EPHB3-201ENST00000330394 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
EPHB3-201ENST00000330394 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 CEP131Q9UPN4 1083 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 RPS6KB1P23443 525 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
EPHB3-201ENST00000330394 CCDC175P0C221 793 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 SSRP1Q08945 709 aaKnown RBP16.12■□□□□ 0.17
EPHB3-201ENST00000330394 ADCK5Q3MIX3 580 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 G3V3G9 751 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 ATP2C2O75185 946 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 NCOA7Q8NI08 942 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 CAPZA3Q96KX2 299 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 KIF2CQ99661 725 aa16.12■□□□□ 0.17
EPHB3-201ENST00000330394 XPO4Q9C0E2 1151 aaKnown RBP16.12■□□□□ 0.17
EPHB3-201ENST00000330394 ZFYVE27Q5T4F4 411 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
EPHB3-201ENST00000330394 XAGE3Q8WTP9 111 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 KRT18P05783 430 aaKnown RBP16.11■□□□□ 0.17
EPHB3-201ENST00000330394 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 BAG1Q99933 345 aaPredicted RBP16.11■□□□□ 0.17
EPHB3-201ENST00000330394 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 PAFAH1B1P43034 410 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 FANCCQ00597 558 aa16.11■□□□□ 0.17
EPHB3-201ENST00000330394 HLTFQ14527 1009 aaKnown RBP eCLIP16.11■□□□□ 0.17
EPHB3-201ENST00000330394 GUCA1BQ9UMX6 200 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 PRC1O43663 620 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 IVLP07476 585 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 OAS2P29728 719 aaKnown RBP16.1■□□□□ 0.17
EPHB3-201ENST00000330394 TDRD12Q587J7 1177 aaKnown RBP16.1■□□□□ 0.17
EPHB3-201ENST00000330394 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 ANKRD13DQ6ZTN6 518 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 RANBP6O60518 1105 aaKnown RBP16.1■□□□□ 0.17
EPHB3-201ENST00000330394 MYL5Q02045 173 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
EPHB3-201ENST00000330394 AMOTL2Q9Y2J4 779 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 SBNO2Q9Y2G9 1366 aa16.1■□□□□ 0.17
EPHB3-201ENST00000330394 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 LUC7LQ9NQ29 371 aaKnown RBP16.09■□□□□ 0.17
EPHB3-201ENST00000330394 MRVI1Q9Y6F6 885 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 CTAGE9A4FU28 777 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 IRX3P78415 501 aaPredicted RBP16.09■□□□□ 0.17
EPHB3-201ENST00000330394 PPARDQ03181 441 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 CUL4AQ13619 759 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 DHX58Q96C10 678 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 FKBP15Q5T1M5 1219 aa16.09■□□□□ 0.17
EPHB3-201ENST00000330394 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
EPHB3-201ENST00000330394 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.17
EPHB3-201ENST00000330394 CCDC113Q9H0I3 377 aa16.08■□□□□ 0.17
EPHB3-201ENST00000330394 PLA2R1Q13018 1463 aa16.08■□□□□ 0.17
EPHB3-201ENST00000330394 ABCC2Q92887 1545 aa16.08■□□□□ 0.17
EPHB3-201ENST00000330394 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.17
EPHB3-201ENST00000330394 PTPN21Q16825 1174 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 TFCP2Q12800 502 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 CACNA2D4Q7Z3S7 1137 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 LINS1Q8NG48 757 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 TAF4BQ92750 862 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.16
EPHB3-201ENST00000330394 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
EPHB3-201ENST00000330394 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
EPHB3-201ENST00000330394 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
EPHB3-201ENST00000330394 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
EPHB3-201ENST00000330394 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 ZBTB43O43298 467 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 GPTP24298 496 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 TIMM10P62072 90 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 ARID5BQ14865 1188 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 LARGE1O95461 756 aa16.07■□□□□ 0.16
EPHB3-201ENST00000330394 IFIT5Q13325 482 aaKnown RBP16.07■□□□□ 0.16
EPHB3-201ENST00000330394 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms