RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 FAM114A2Q9NRY5 505 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 VTI1AQ96AJ9 217 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 ZKSCAN5Q9Y2L8 839 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 CCDC196A0A1B0GTZ2 297 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
CIITA-201ENST00000324288 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
CIITA-201ENST00000324288 FAM212AQ96EL1 285 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 TBC1D32Q96NH3 1257 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 SELENOOQ9BVL4 669 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 TPX2Q9ULW0 747 aaKnown RBP8.98□□□□□ -0.97
CIITA-201ENST00000324288 FAM170AA1A519 330 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 PSMD6Q15008 389 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 EHMT1Q9H9B1 1298 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 RASAL2Q9UJF2 1139 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 ELF2Q15723 593 aa8.98□□□□□ -0.97
CIITA-201ENST00000324288 UBLCP1Q8WVY7 318 aaPredicted RBP8.98□□□□□ -0.97
CIITA-201ENST00000324288 TXNDC9O14530 226 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 WAPLQ7Z5K2 1190 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 CCDC170Q8IYT3 715 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 TSC1Q92574 1164 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 SMC6Q96SB8 1091 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 TACC1O75410 805 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 FAM114A1Q8IWE2 563 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 MAP3K2Q9Y2U5 619 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
CIITA-201ENST00000324288 ZNF131P52739 623 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 TCP11L1Q9NUJ3 509 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 ACTN2P35609 894 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 GSTA5Q7RTV2 222 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
CIITA-201ENST00000324288 ZNF622Q969S3 477 aaKnown RBP eCLIP8.97□□□□□ -0.97
CIITA-201ENST00000324288 AFAP1L1Q8TED9 768 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 MRRFQ96E11 262 aaKnown RBP8.97□□□□□ -0.97
CIITA-201ENST00000324288 PLIN2Q99541 437 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 KAT14Q9H8E8 782 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 TSPY2A6NKD2 308 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 METAP2P50579 478 aaKnown RBP eCLIP8.97□□□□□ -0.97
CIITA-201ENST00000324288 CEP120Q8N960 986 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 GUCA1BQ9UMX6 200 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 KIAA0753Q2KHM9 967 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 HEATR3Q7Z4Q2 680 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 TBC1D5Q92609 795 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 STX17P56962 302 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 LRRC43Q8N309 656 aa8.97□□□□□ -0.97
CIITA-201ENST00000324288 IQCGQ9H095 443 aaKnown RBP8.97□□□□□ -0.97
CIITA-201ENST00000324288 ZFYP08048 801 aaPredicted RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 UBA7P41226 1012 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 CCDC102BQ68D86 513 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 MORC4Q8TE76 937 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 INPP5BP32019 993 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 ANXA1P04083 346 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 INTS8Q75QN2 995 aaKnown RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 CCDC50Q8IVM0 306 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 SH3BP5O60239 455 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 TTF1Q15361 905 aaPredicted RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 SUDS3Q9H7L9 328 aaPredicted RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 PLEKHH1Q9ULM0 1364 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 UAP1Q16222 522 aaPredicted RBP8.96□□□□□ -0.97
CIITA-201ENST00000324288 NME9Q86XW9 330 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 FAM184BQ9ULE4 1060 aa8.96□□□□□ -0.97
CIITA-201ENST00000324288 SUPT6HQ7KZ85 1726 aaKnown RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 IGHDP01880 384 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 MFSD6Q6ZSS7 791 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 PNMA8AQ86V59 439 aaPredicted RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 CWC25Q9NXE8 425 aaPredicted RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 CEP85LQ5SZL2 805 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 KSR1Q8IVT5 923 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 BAZ2BQ9UIF8 2168 aaKnown RBP8.96□□□□□ -0.98
CIITA-201ENST00000324288 EVCP57679 992 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 PLEKHA4Q9H4M7 779 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 ATP2B3Q16720 1220 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 SAMD15Q9P1V8 674 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 JAG2Q9Y219 1238 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 CALM1P0DP23 149 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 CALM2P0DP24 149 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 CALM3P0DP25 149 aa8.96□□□□□ -0.98
CIITA-201ENST00000324288 STAT6P42226 847 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 LMNTD2Q8IXW0 634 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 STMN2Q93045 179 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 STIM2Q9P246 746 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 ZSCAN22P10073 491 aaPredicted RBP8.95□□□□□ -0.98
CIITA-201ENST00000324288 ASIC1P78348 528 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 CCDC77Q9BR77 488 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 DDX46Q7L014 1031 aaKnown RBP8.95□□□□□ -0.98
CIITA-201ENST00000324288 BANK1Q8NDB2 785 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 EHBP1Q8NDI1 1231 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 CYLC1P35663 651 aaPredicted RBP8.95□□□□□ -0.98
CIITA-201ENST00000324288 RBSNQ9H1K0 784 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 DHX58Q96C10 678 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 ZBTB21Q9ULJ3 1066 aa8.95□□□□□ -0.98
CIITA-201ENST00000324288 KIF3CO14782 793 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 UBE3BQ7Z3V4 1068 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 WDHD1O75717 1129 aaPredicted RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 GBP1P32455 592 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 STX8Q9UNK0 236 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms