RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 GJA3Q9Y6H8 435 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 LTBP1Q14766 1721 aa18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 POTECB2RU33 542 aa18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 NBPF7P0C2Y1 421 aaPredicted RBP18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 CCT4P50991 539 aaKnown RBP18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 ZC3H12CQ9C0D7 883 aaKnown RBP18.48■□□□□ 0.55
TUBA3D-201ENST00000321253 UTYO14607 1347 aa18.47■□□□□ 0.55
TUBA3D-201ENST00000321253 CCDC57Q2TAC2 916 aa18.47■□□□□ 0.55
TUBA3D-201ENST00000321253 EPHA10Q5JZY3 1008 aa18.47■□□□□ 0.55
TUBA3D-201ENST00000321253 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
TUBA3D-201ENST00000321253 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
TUBA3D-201ENST00000321253 SCN4AP35499 1836 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 G3V3G9 751 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 ATP2B4P23634 1241 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 TAF7LQ5H9L4 462 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 DCAF8Q5TAQ9 597 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 ARHGAP45Q92619 1136 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 GPR101Q96P66 508 aaPredicted RBP18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 HACL1Q9UJ83 578 aa18.46■□□□□ 0.55
TUBA3D-201ENST00000321253 LMOD1P29536 600 aaPredicted RBP18.45■□□□□ 0.54
TUBA3D-201ENST00000321253 FSTL1Q12841 308 aa18.45■□□□□ 0.54
TUBA3D-201ENST00000321253 CXCL9Q07325 125 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 TNIP1Q15025 636 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 CIAPIN1Q6FI81 312 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 ANKRD2Q9GZV1 360 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 DBNDD1Q9H9R9 158 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 BCAR3O75815 825 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 RAD17O75943 681 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
TUBA3D-201ENST00000321253 ECE2O60344 883 aa18.43■□□□□ 0.54
TUBA3D-201ENST00000321253 HSPA6P17066 643 aa18.43■□□□□ 0.54
TUBA3D-201ENST00000321253 EPHX2P34913 555 aa18.43■□□□□ 0.54
TUBA3D-201ENST00000321253 KAZALD1Q96I82 304 aa18.43■□□□□ 0.54
TUBA3D-201ENST00000321253 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
TUBA3D-201ENST00000321253 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
TUBA3D-201ENST00000321253 KCNJ4P48050 445 aa18.42■□□□□ 0.54
TUBA3D-201ENST00000321253 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
TUBA3D-201ENST00000321253 LEMD3Q9Y2U8 911 aa18.42■□□□□ 0.54
TUBA3D-201ENST00000321253 CHRNDQ07001 517 aa18.41■□□□□ 0.54
TUBA3D-201ENST00000321253 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
TUBA3D-201ENST00000321253 PNMA8AQ86V59 439 aaPredicted RBP18.41■□□□□ 0.54
TUBA3D-201ENST00000321253 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
TUBA3D-201ENST00000321253 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 SCNN1DP51172 638 aa18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 ZNF594Q96JF6 807 aaPredicted RBP18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 ZNF804BA4D1E1 1349 aa18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 MED23Q9ULK4 1368 aa18.4■□□□□ 0.54
TUBA3D-201ENST00000321253 TRIM27P14373 513 aa18.39■□□□□ 0.54
TUBA3D-201ENST00000321253 GMPSP49915 693 aaPredicted RBP18.39■□□□□ 0.54
TUBA3D-201ENST00000321253 LDHDQ86WU2 507 aa18.39■□□□□ 0.54
TUBA3D-201ENST00000321253 ANKRD44Q8N8A2 993 aa18.39■□□□□ 0.54
TUBA3D-201ENST00000321253 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
TUBA3D-201ENST00000321253 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.53
TUBA3D-201ENST00000321253 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
TUBA3D-201ENST00000321253 GPRC5DQ9NZD1 345 aa18.39■□□□□ 0.53
TUBA3D-201ENST00000321253 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
TUBA3D-201ENST00000321253 WTIPA6NIX2 430 aaPredicted RBP18.38■□□□□ 0.53
TUBA3D-201ENST00000321253 PSMD14O00487 310 aa18.38■□□□□ 0.53
TUBA3D-201ENST00000321253 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
TUBA3D-201ENST00000321253 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
TUBA3D-201ENST00000321253 EPS15P42566 896 aa18.38■□□□□ 0.53
TUBA3D-201ENST00000321253 HELBQ8NG08 1087 aaPredicted RBP18.37■□□□□ 0.53
TUBA3D-201ENST00000321253 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
TUBA3D-201ENST00000321253 PLIN1O60240 522 aa18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 TAF5LO75529 589 aa18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 APLP1P51693 650 aa18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 PODNQ7Z5L7 613 aa18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
TUBA3D-201ENST00000321253 GNAI3P08754 354 aa18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 RPS12P25398 132 aaKnown RBP18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 MEIS3Q99687 375 aa18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 ZBTB12Q9Y330 459 aaPredicted RBP18.35■□□□□ 0.53
TUBA3D-201ENST00000321253 H7C1D1 291 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 DPF2Q92785 391 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 LRRFIP2Q9Y608 721 aaKnown RBP18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 MROH5Q6ZUA9 1318 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 SCN9AQ15858 1988 aa18.34■□□□□ 0.53
TUBA3D-201ENST00000321253 KLRK1P26718 216 aa18.33■□□□□ 0.53
TUBA3D-201ENST00000321253 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.53
TUBA3D-201ENST00000321253 PUS3Q9BZE2 481 aaKnown RBP18.33■□□□□ 0.53
TUBA3D-201ENST00000321253 USP17L3A6NCW0 530 aa18.33■□□□□ 0.52
TUBA3D-201ENST00000321253 USP17L4A6NCW7 530 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms