RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 GPSM2P81274 684 aa23.42■■□□□ 1.34
SWI5-201ENST00000320188 DOK7Q18PE1 504 aa23.42■■□□□ 1.34
SWI5-201ENST00000320188 REM2Q8IYK8 340 aaPredicted RBP23.42■■□□□ 1.34
SWI5-201ENST00000320188 FAM89AQ96GI7 184 aa23.42■■□□□ 1.34
SWI5-201ENST00000320188 RNF186Q9NXI6 227 aa23.42■■□□□ 1.34
SWI5-201ENST00000320188 CHPF2Q9P2E5 772 aa23.42■■□□□ 1.34
SWI5-201ENST00000320188 SOX10P56693 466 aa23.41■■□□□ 1.34
SWI5-201ENST00000320188 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
SWI5-201ENST00000320188 ANKRD13DQ6ZTN6 518 aa23.41■■□□□ 1.34
SWI5-201ENST00000320188 ZC3H12CQ9C0D7 883 aaKnown RBP23.41■■□□□ 1.34
SWI5-201ENST00000320188 PAPPA2Q9BXP8 1791 aa23.41■■□□□ 1.34
SWI5-201ENST00000320188 TBC1D16Q8TBP0 767 aa23.4■■□□□ 1.34
SWI5-201ENST00000320188 ISCA1Q9BUE6 129 aa23.4■■□□□ 1.34
SWI5-201ENST00000320188 COL4A1P02462 1669 aa23.39■■□□□ 1.34
SWI5-201ENST00000320188 CTU1Q7Z7A3 348 aaKnown RBP23.39■■□□□ 1.33
SWI5-201ENST00000320188 CDCA5Q96FF9 252 aa23.39■■□□□ 1.33
SWI5-201ENST00000320188 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
SWI5-201ENST00000320188 IRS4O14654 1257 aaPredicted RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 VIL1P09327 827 aaKnown RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 HOXB7P09629 217 aa23.38■■□□□ 1.33
SWI5-201ENST00000320188 HSP90B1P14625 803 aaKnown RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 RPS8P62241 208 aaKnown RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 KCNQ5Q9NR82 932 aa23.38■■□□□ 1.33
SWI5-201ENST00000320188 DBF4Q9UBU7 674 aaPredicted RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 LAS1LQ9Y4W2 734 aaKnown RBP23.38■■□□□ 1.33
SWI5-201ENST00000320188 ZNF609O15014 1411 aa23.37■■□□□ 1.33
SWI5-201ENST00000320188 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
SWI5-201ENST00000320188 RTL5Q5HYW3 569 aaPredicted RBP23.37■■□□□ 1.33
SWI5-201ENST00000320188 ANKIB1Q9P2G1 1089 aa23.37■■□□□ 1.33
SWI5-201ENST00000320188 CHL1O00533 1208 aa23.36■■□□□ 1.33
SWI5-201ENST00000320188 UFL1O94874 794 aa23.36■■□□□ 1.33
SWI5-201ENST00000320188 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
SWI5-201ENST00000320188 CSRNP1Q96S65 589 aa23.36■■□□□ 1.33
SWI5-201ENST00000320188 FKBP1BP68106 108 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 RASAL3Q86YV0 1011 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 AGBL3Q8NEM8 1001 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 HYPKQ9NX55 129 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 PODXL2Q9NZ53 605 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 GGA1Q9UJY5 639 aa23.35■■□□□ 1.33
SWI5-201ENST00000320188 ANGEL2Q5VTE6 544 aaKnown RBP23.34■■□□□ 1.33
SWI5-201ENST00000320188 ZNF280AP59817 542 aaPredicted RBP23.33■■□□□ 1.33
SWI5-201ENST00000320188 TRIM28Q13263 835 aaKnown RBP23.33■■□□□ 1.33
SWI5-201ENST00000320188 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
SWI5-201ENST00000320188 ASTN2O75129 1339 aaPredicted RBP23.33■■□□□ 1.32
SWI5-201ENST00000320188 MYH3P11055 1940 aa23.32■■□□□ 1.32
SWI5-201ENST00000320188 SCARF1Q14162 830 aa23.32■■□□□ 1.32
SWI5-201ENST00000320188 ZBTB38Q8NAP3 1195 aaPredicted RBP23.32■■□□□ 1.32
SWI5-201ENST00000320188 PITPNM2Q9BZ72 1349 aa23.32■■□□□ 1.32
SWI5-201ENST00000320188 GOLGA2Q08379 1002 aa23.31■■□□□ 1.32
SWI5-201ENST00000320188 RALBP1Q15311 655 aa23.31■■□□□ 1.32
SWI5-201ENST00000320188 PKN2Q16513 984 aaKnown RBP23.31■■□□□ 1.32
SWI5-201ENST00000320188 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
SWI5-201ENST00000320188 PRPF38BQ5VTL8 546 aaKnown RBP23.31■■□□□ 1.32
SWI5-201ENST00000320188 HDAC9Q9UKV0 1011 aa23.31■■□□□ 1.32
SWI5-201ENST00000320188 SPEF2Q9C093 1822 aa23.31■■□□□ 1.32
SWI5-201ENST00000320188 RIC3Q7Z5B4 369 aa23.3■■□□□ 1.32
SWI5-201ENST00000320188 CCDC146Q8IYE0 955 aa23.3■■□□□ 1.32
SWI5-201ENST00000320188 USP17L8P0C7I0 530 aa23.29■■□□□ 1.32
SWI5-201ENST00000320188 MYOZ2Q9NPC6 264 aa23.29■■□□□ 1.32
SWI5-201ENST00000320188 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
SWI5-201ENST00000320188 HPS5Q9UPZ3 1129 aa23.29■■□□□ 1.32
SWI5-201ENST00000320188 XDHP47989 1333 aa23.28■■□□□ 1.32
SWI5-201ENST00000320188 DUSP27Q5VZP5 1158 aa23.27■■□□□ 1.32
SWI5-201ENST00000320188 RUNDC1Q96C34 613 aa23.27■■□□□ 1.32
SWI5-201ENST00000320188 USP17L3A6NCW0 530 aa23.26■■□□□ 1.31
SWI5-201ENST00000320188 USP17L4A6NCW7 530 aa23.26■■□□□ 1.31
SWI5-201ENST00000320188 USP17L1Q7RTZ2 530 aa23.26■■□□□ 1.31
SWI5-201ENST00000320188 ANKRD18AQ8IVF6 992 aa23.26■■□□□ 1.31
SWI5-201ENST00000320188 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
SWI5-201ENST00000320188 PDE8AO60658 829 aa23.25■■□□□ 1.31
SWI5-201ENST00000320188 ATP2B4P23634 1241 aa23.25■■□□□ 1.31
SWI5-201ENST00000320188 NF2P35240 595 aa23.25■■□□□ 1.31
SWI5-201ENST00000320188 TTLL12Q14166 644 aaPredicted RBP23.25■■□□□ 1.31
SWI5-201ENST00000320188 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
SWI5-201ENST00000320188 PODNQ7Z5L7 613 aa23.25■■□□□ 1.31
SWI5-201ENST00000320188 PCCAP05165 728 aaPredicted RBP23.24■■□□□ 1.31
SWI5-201ENST00000320188 CCDC191Q8NCU4 936 aa23.24■■□□□ 1.31
SWI5-201ENST00000320188 ZNF296Q8WUU4 475 aaPredicted RBP23.24■■□□□ 1.31
SWI5-201ENST00000320188 GMLQ99445 158 aa23.24■■□□□ 1.31
SWI5-201ENST00000320188 MYD88Q99836 296 aa23.24■■□□□ 1.31
SWI5-201ENST00000320188 ZNF646O15015 1829 aaPredicted RBP23.23■■□□□ 1.31
SWI5-201ENST00000320188 UBE2Q2LH0YL09 131 aa23.22■■□□□ 1.31
SWI5-201ENST00000320188 TBC1D8O95759 1140 aa23.22■■□□□ 1.31
SWI5-201ENST00000320188 OGFOD1Q8N543 542 aa23.22■■□□□ 1.31
SWI5-201ENST00000320188 CCDC85AQ96PX6 553 aaPredicted RBP23.22■■□□□ 1.31
SWI5-201ENST00000320188 CWC25Q9NXE8 425 aaPredicted RBP23.22■■□□□ 1.31
SWI5-201ENST00000320188 SREBF2Q12772 1141 aa23.21■■□□□ 1.31
SWI5-201ENST00000320188 MOB2Q70IA6 237 aa23.21■■□□□ 1.31
SWI5-201ENST00000320188 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
SWI5-201ENST00000320188 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
SWI5-201ENST00000320188 MED23Q9ULK4 1368 aa23.21■■□□□ 1.31
SWI5-201ENST00000320188 MYO3BQ8WXR4 1341 aa23.2■■□□□ 1.3
SWI5-201ENST00000320188 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
SWI5-201ENST00000320188 MBIPQ9NS73 344 aa23.2■■□□□ 1.3
SWI5-201ENST00000320188 DDX58O95786 925 aaKnown RBP23.19■■□□□ 1.3
SWI5-201ENST00000320188 FBXO46Q6PJ61 603 aaPredicted RBP23.19■■□□□ 1.3
SWI5-201ENST00000320188 FBXW7Q969H0 707 aa23.19■■□□□ 1.3
SWI5-201ENST00000320188 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
SWI5-201ENST00000320188 SCAF8Q9UPN6 1271 aaKnown RBP23.19■■□□□ 1.3
SWI5-201ENST00000320188 GPR25O00155 361 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms