RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 TNNC1P63316 161 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 SH3BP5O60239 455 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 VPS52Q8N1B4 723 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
FARP1-201ENST00000319562 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 ZKSCAN5Q9Y2L8 839 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 PANK2Q9BZ23 570 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
FARP1-201ENST00000319562 NEDD9Q14511 834 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
FARP1-201ENST00000319562 PTGS1P23219 599 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 NUF2Q9BZD4 464 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 EEF2P13639 858 aaKnown RBP13.76□□□□□ -0.21
FARP1-201ENST00000319562 CEP85LQ5SZL2 805 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 FYB2Q5VWT5 728 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 CCDC26Q8TAB7 109 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 TAF7Q15545 349 aaPredicted RBP13.76□□□□□ -0.21
FARP1-201ENST00000319562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.76□□□□□ -0.21
FARP1-201ENST00000319562 VCXQ9H320 206 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 FAM169AQ9Y6X4 670 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
FARP1-201ENST00000319562 PPP1R9BQ96SB3 815 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 MRVI1Q9Y6F6 885 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
FARP1-201ENST00000319562 RARSP54136 660 aaKnown RBP13.75□□□□□ -0.21
FARP1-201ENST00000319562 CALCOCO2Q13137 446 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 MYD88Q99836 296 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 NEK11Q8NG66 645 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 IFT81Q8WYA0 676 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 CCT6BQ92526 530 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 KRT23Q9C075 422 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 ECHDC1Q9NTX5 307 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
FARP1-201ENST00000319562 LDHCP07864 332 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 SEPT14Q6ZU15 432 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 AFMP43652 599 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 SATB1Q01826 763 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 RFC1P35251 1148 aaPredicted RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 CCDC8Q9H0W5 538 aaPredicted RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 MAK16Q9BXY0 300 aaKnown RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 ARHGAP24Q8N264 748 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 UBLCP1Q8WVY7 318 aaPredicted RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 DAPK1P53355 1430 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 SSH1Q8WYL5 1049 aa13.74□□□□□ -0.21
FARP1-201ENST00000319562 LRPPRCP42704 1394 aaKnown RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
FARP1-201ENST00000319562 TUBB2AQ13885 445 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 CCDC25Q86WR0 208 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 TUBB2BQ9BVA1 445 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 SH2D4BQ5SQS7 431 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 KRBA2Q6ZNG9 492 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
FARP1-201ENST00000319562 ZNF830Q96NB3 372 aaPredicted RBP13.73□□□□□ -0.21
FARP1-201ENST00000319562 HDAC9Q9UKV0 1011 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 AFAP1L1Q8TED9 768 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 CABP5Q9NP86 173 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 TMEM110-MUSTN1A8MSY1 372 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 SH3BGRP55822 239 aaPredicted RBP13.73□□□□□ -0.21
FARP1-201ENST00000319562 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
FARP1-201ENST00000319562 WTAPQ15007 396 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 CLUL1Q15846 466 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 TMOD3Q9NYL9 352 aa13.73□□□□□ -0.21
FARP1-201ENST00000319562 INF2Q27J81 1249 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 FAM114A2Q9NRY5 505 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 GNAQP50148 359 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
FARP1-201ENST00000319562 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.72□□□□□ -0.21
FARP1-201ENST00000319562 RABGAP1Q9Y3P9 1069 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 CASKIN1Q8WXD9 1431 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 SMIM23A6NLE4 172 aa13.72□□□□□ -0.21
FARP1-201ENST00000319562 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms