RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 GTF3C6Q969F1 213 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
ATG4C-201ENST00000317868 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
ATG4C-201ENST00000317868 PDCP20941 246 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 CCDC129Q6ZRS4 1044 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 RREB1Q92766 1687 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
ATG4C-201ENST00000317868 TCEANC2Q96MN5 208 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
ATG4C-201ENST00000317868 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
ATG4C-201ENST00000317868 FIBPO43427 364 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 ZMYM1Q5SVZ6 1142 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 PAG1Q9NWQ8 432 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 LARP1BQ659C4 914 aaKnown RBP16.4■□□□□ 0.22
ATG4C-201ENST00000317868 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 DOT1LQ8TEK3 1739 aa16.4■□□□□ 0.22
ATG4C-201ENST00000317868 C4AP0C0L4 1744 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 MCM5P33992 734 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 LAMB2P55268 1798 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 DTNBO60941 627 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 TTC6Q86TZ1 520 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 ZKSCAN5Q9Y2L8 839 aa16.39■□□□□ 0.21
ATG4C-201ENST00000317868 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
ATG4C-201ENST00000317868 RNF214Q8ND24 703 aa16.38■□□□□ 0.21
ATG4C-201ENST00000317868 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
ATG4C-201ENST00000317868 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
ATG4C-201ENST00000317868 CHD4Q14839 1912 aa16.38■□□□□ 0.21
ATG4C-201ENST00000317868 ECM29Q5VYK3 1845 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 TIMM10P62072 90 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 CSF1RP07333 972 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
ATG4C-201ENST00000317868 Q6ZUG5 572 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
ATG4C-201ENST00000317868 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
ATG4C-201ENST00000317868 OFD1O75665 1012 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 HMGB1P09429 215 aaKnown RBP16.36■□□□□ 0.21
ATG4C-201ENST00000317868 KRT85P78386 507 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 MAST3O60307 1309 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 CASZ1Q86V15 1759 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 GOLIM4O00461 696 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 PCCAP05165 728 aaPredicted RBP16.36■□□□□ 0.21
ATG4C-201ENST00000317868 MSNP26038 577 aaKnown RBP16.36■□□□□ 0.21
ATG4C-201ENST00000317868 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
ATG4C-201ENST00000317868 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 CDHR2Q9BYE9 1310 aa16.36■□□□□ 0.21
ATG4C-201ENST00000317868 ZNF335Q9H4Z2 1342 aaPredicted RBP16.36■□□□□ 0.21
ATG4C-201ENST00000317868 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
ATG4C-201ENST00000317868 BCL9O00512 1426 aa16.35■□□□□ 0.21
ATG4C-201ENST00000317868 PFKFB2O60825 505 aa16.35■□□□□ 0.21
ATG4C-201ENST00000317868 LLPHQ9BRT6 129 aaKnown RBP16.35■□□□□ 0.21
ATG4C-201ENST00000317868 TEX13AQ9BXU3 409 aaPredicted RBP16.35■□□□□ 0.21
ATG4C-201ENST00000317868 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
ATG4C-201ENST00000317868 HSPD1P10809 573 aaKnown RBP16.35■□□□□ 0.21
ATG4C-201ENST00000317868 RESTQ13127 1097 aa16.35■□□□□ 0.21
ATG4C-201ENST00000317868 RNF113AO15541 343 aaKnown RBP16.34■□□□□ 0.21
ATG4C-201ENST00000317868 SCRN1Q12765 414 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
ATG4C-201ENST00000317868 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 TMOD3Q9NYL9 352 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 SLIT2O94813 1529 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 A0A1B0GUL6 1792 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 FOXP2O15409 715 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 JAK2O60674 1132 aa16.34■□□□□ 0.21
ATG4C-201ENST00000317868 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
ATG4C-201ENST00000317868 RBM43Q6ZSC3 357 aaKnown RBP16.34■□□□□ 0.21
ATG4C-201ENST00000317868 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.21
ATG4C-201ENST00000317868 ATRNO75882 1429 aa16.33■□□□□ 0.21
ATG4C-201ENST00000317868 PIGBQ92521 554 aa16.33■□□□□ 0.21
ATG4C-201ENST00000317868 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.21
ATG4C-201ENST00000317868 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
ATG4C-201ENST00000317868 ZBTB38Q8NAP3 1195 aaPredicted RBP16.33■□□□□ 0.2
ATG4C-201ENST00000317868 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
ATG4C-201ENST00000317868 MAP3K15Q6ZN16 1313 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 M0R2C6 588 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 EVCP57679 992 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 STK3Q13188 491 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 ASAP1Q9ULH1 1129 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 TERF1P54274 439 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
ATG4C-201ENST00000317868 NSUN7Q8NE18 718 aaKnown RBP16.32■□□□□ 0.2
ATG4C-201ENST00000317868 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms