RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 DHX32Q7L7V1 743 aaKnown RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 A2ML1A8K2U0 1454 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 PI4KAP2A4QPH2 592 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 URI1O94763 535 aaPredicted RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 RAPGEF3O95398 923 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 TEFQ10587 303 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 KSR2Q6VAB6 950 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 TXNDC2Q86VQ3 553 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 PI4KAP1Q8N8J0 262 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 IQUBQ8NA54 791 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 PPP1R13BQ96KQ4 1090 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 ESF1Q9H501 851 aaKnown RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 NEXNQ0ZGT2 675 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 ACEP12821 1306 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 OVOS2A0A0J9YW53 1432 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 OVOS2Q6IE36 1432 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 MAP4K4O95819 1239 aaPredicted RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 CPLX2Q6PUV4 134 aaKnown RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 FEZ2Q9UHY8 353 aaPredicted RBP5.54□□□□□ -1.52
PTPN13-201ENST00000316707 PPLO60437 1756 aa5.54□□□□□ -1.52
PTPN13-201ENST00000316707 TAF5LO75529 589 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 HNRNPLLQ8WVV9 542 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 LARP6Q9BRS8 491 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 UBXN6Q9BZV1 441 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 MED23Q9ULK4 1368 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ZSCAN26Q16670 478 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 OLFM4Q6UX06 510 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 DACH1Q9UI36 760 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 STX10O60499 249 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 EVCP57679 992 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 MYL5Q02045 173 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 XPO4Q9C0E2 1151 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 YY1AP1Q9H869 796 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 BRMS1Q9HCU9 246 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 POLR3EQ9NVU0 708 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 TOP1P11387 765 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 TOB2Q14106 344 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ZNF274Q96GC6 653 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 USP27XA6NNY8 438 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 FOXO3O43524 673 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ATP5JP18859 108 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 CC2D1AQ6P1N0 951 aaPredicted RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 MROH2AA6NES4 1674 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 NPHP1O15259 732 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ACTN2P35609 894 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 PLA2G4AP47712 749 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 NLRP12P59046 1061 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 SMC1AQ14683 1233 aaKnown RBP5.53□□□□□ -1.52
PTPN13-201ENST00000316707 GOLGA1Q92805 767 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 USP28Q96RU2 1077 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 IFNKQ9P0W0 207 aa5.53□□□□□ -1.52
PTPN13-201ENST00000316707 ALKQ9UM73 1620 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 PTPDC1A2A3K4 754 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 MYO1CO00159 1063 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CMA1P23946 247 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 SF3B2Q13435 895 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CEP112Q8N8E3 955 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CLTCQ00610 1675 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CAMSAP1Q5T5Y3 1602 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 GNL2Q13823 731 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC191Q8NCU4 936 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 EAF2Q96CJ1 260 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 SPTLC2O15270 562 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 SERPINC1P01008 464 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 FANCCQ00597 558 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CT47A1Q5JQC4 288 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 FBXO31Q5XUX0 539 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 FMR1NBQ8N0W7 255 aaPredicted RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 TRIM34Q9BYJ4 488 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 ZNF446Q9NWS9 450 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 MCM3P25205 808 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 GNG11P61952 73 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 RAD51AP2Q09MP3 1159 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CFAP100Q494V2 611 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 NSUN7Q8NE18 718 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 NGDNQ8NEJ9 315 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 FBXO18Q8NFZ0 1043 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 RSPH14Q9UHP6 348 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 USP6P35125 1406 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 PRR36Q9H6K5 1346 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 EIF2S2P20042 333 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 USP8P40818 1118 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 EIF4A1P60842 406 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 AGXT2Q9BYV1 514 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 A0A1B0GUL7 405 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 CPLX1O14810 134 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 OAS2P29728 719 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 ADD1P35611 737 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 STK3Q13188 491 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 DHX40Q8IX18 779 aaKnown RBP5.52□□□□□ -1.53
PTPN13-201ENST00000316707 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 PCDHA7Q9UN72 937 aa5.52□□□□□ -1.53
PTPN13-201ENST00000316707 JCADQ9P266 1359 aa5.51□□□□□ -1.53
PTPN13-201ENST00000316707 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms