RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
HNF4A-201ENST00000316099 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
HNF4A-201ENST00000316099 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 PRIM1P49642 420 aaKnown RBP12.53□□□□□ -0.4
HNF4A-201ENST00000316099 ZMYND15Q9H091 742 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 CDKL5O76039 1030 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
HNF4A-201ENST00000316099 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 IFIT1P09914 478 aaKnown RBP12.53□□□□□ -0.4
HNF4A-201ENST00000316099 PRPF40BQ6NWY9 871 aaKnown RBP12.53□□□□□ -0.4
HNF4A-201ENST00000316099 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
HNF4A-201ENST00000316099 MCM3P25205 808 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 ANO10Q9NW15 660 aa12.53□□□□□ -0.4
HNF4A-201ENST00000316099 CASTP20810 708 aaKnown RBP12.52□□□□□ -0.4
HNF4A-201ENST00000316099 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.4
HNF4A-201ENST00000316099 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.4
HNF4A-201ENST00000316099 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.4
HNF4A-201ENST00000316099 CCDC148Q8NFR7 591 aa12.52□□□□□ -0.4
HNF4A-201ENST00000316099 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.4
HNF4A-201ENST00000316099 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.4
HNF4A-201ENST00000316099 ODF2Q5BJF6 829 aa12.52□□□□□ -0.4
HNF4A-201ENST00000316099 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
HNF4A-201ENST00000316099 TFCP2Q12800 502 aa12.52□□□□□ -0.41
HNF4A-201ENST00000316099 DCCP43146 1447 aa12.52□□□□□ -0.41
HNF4A-201ENST00000316099 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
HNF4A-201ENST00000316099 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.41
HNF4A-201ENST00000316099 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 CTAGE5O15320 804 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 TNNT1P13805 278 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.41
HNF4A-201ENST00000316099 FAM107BQ9H098 131 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 TTC41PQ6P2S7 1318 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 IGHMBP2P38935 993 aaKnown RBP12.51□□□□□ -0.41
HNF4A-201ENST00000316099 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 TTLL7Q6ZT98 887 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 MAP9Q49MG5 647 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 CASQ1P31415 396 aa12.51□□□□□ -0.41
HNF4A-201ENST00000316099 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
HNF4A-201ENST00000316099 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
HNF4A-201ENST00000316099 LDHAL6AQ6ZMR3 332 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 CDK5RAP3Q96JB5 506 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 ZPR1O75312 459 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
HNF4A-201ENST00000316099 CHMLP26374 656 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
HNF4A-201ENST00000316099 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
HNF4A-201ENST00000316099 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 GOLIM4O00461 696 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 GSDMDP57764 484 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
HNF4A-201ENST00000316099 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 CAMK4Q16566 473 aa12.5□□□□□ -0.41
HNF4A-201ENST00000316099 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 ZSCAN23Q3MJ62 389 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 ATP2B1P20020 1258 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 FAM89AQ96GI7 184 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
HNF4A-201ENST00000316099 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
HNF4A-201ENST00000316099 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 SLC3A2P08195 630 aaKnown RBP12.49□□□□□ -0.41
HNF4A-201ENST00000316099 CFAP100Q494V2 611 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 LRSAM1Q6UWE0 723 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
HNF4A-201ENST00000316099 ADCY5O95622 1261 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 RBM25P49756 843 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 FAM193AP78312 1265 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 CTNNA3Q9UI47 895 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 CCAR1Q8IX12 1150 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.412e-10■■■■□ 23.7
HNF4A-201ENST00000316099 LTN1O94822 1766 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 SNRKQ9NRH2 765 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 HEG1Q9ULI3 1381 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 IDH1O75874 414 aaKnown RBP12.48□□□□□ -0.41
HNF4A-201ENST00000316099 ZSCAN25Q6NSZ9 544 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 WASF1Q92558 559 aa12.48□□□□□ -0.41
HNF4A-201ENST00000316099 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 KIF5CO60282 957 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 BMS1Q14692 1282 aaKnown RBP12.47□□□□□ -0.41
HNF4A-201ENST00000316099 SNX21Q969T3 373 aa12.47□□□□□ -0.41
HNF4A-201ENST00000316099 CAVIN2O95810 425 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms