RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CCDC129Q6ZRS4 1044 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 RUFY3Q7L099 469 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.05■■□□□ 1.12
CCDC43-201ENST00000315286 CNNM1Q9NRU3 951 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 SH3TC1Q8TE82 1336 aa22.04■■□□□ 1.12
CCDC43-201ENST00000315286 BAG4O95429 457 aaKnown RBP22.04■■□□□ 1.12
CCDC43-201ENST00000315286 HCLS1P14317 486 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-201ENST00000315286 LINC00116Q8NCU8 138 aa22.04■■□□□ 1.12
CCDC43-201ENST00000315286 LARP6Q9BRS8 491 aaKnown RBP22.04■■□□□ 1.12
CCDC43-201ENST00000315286 UTP14AQ9BVJ6 771 aaKnown RBP22.04■■□□□ 1.12
CCDC43-201ENST00000315286 KCNQ4P56696 695 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 SLFNL1Q499Z3 407 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 CYP46A1Q9Y6A2 500 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 TTC39AQ5SRH9 613 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 VPS53Q5VIR6 699 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 RNF20Q5VTR2 975 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 AK7Q96M32 723 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 PDRG1Q9NUG6 133 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 LIMCH1Q9UPQ0 1083 aa22.03■■□□□ 1.12
CCDC43-201ENST00000315286 ATP2B3Q16720 1220 aa22.02■■□□□ 1.12
CCDC43-201ENST00000315286 PARP10Q53GL7 1025 aa22.02■■□□□ 1.12
CCDC43-201ENST00000315286 USPL1Q5W0Q7 1092 aa22.02■■□□□ 1.12
CCDC43-201ENST00000315286 NIP7Q9Y221 180 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCDC43-201ENST00000315286 TAF6LQ9Y6J9 622 aa22.02■■□□□ 1.12
CCDC43-201ENST00000315286 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.11
CCDC43-201ENST00000315286 ZNF831Q5JPB2 1677 aa22.02■■□□□ 1.11
CCDC43-201ENST00000315286 SPEF2Q9C093 1822 aa22.01■■□□□ 1.11
CCDC43-201ENST00000315286 RPAP1Q9BWH6 1393 aaPredicted RBP22.01■■□□□ 1.11
CCDC43-201ENST00000315286 TICAM2Q86XR7 235 aa22.01■■□□□ 1.11
CCDC43-201ENST00000315286 VGLL2Q8N8G2 317 aa22.01■■□□□ 1.11
CCDC43-201ENST00000315286 COL9A3Q14050 684 aaPredicted RBP22■■□□□ 1.11
CCDC43-201ENST00000315286 SCARF1Q14162 830 aa22■■□□□ 1.11
CCDC43-201ENST00000315286 HELLSQ9NRZ9 838 aa22■■□□□ 1.11
CCDC43-201ENST00000315286 HMG20BQ9P0W2 317 aa22■■□□□ 1.11
CCDC43-201ENST00000315286 PSMA5P28066 241 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 TSGA10IPQ3SY00 556 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 ZMYM1Q5SVZ6 1142 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 FAM182BQ5T319 152 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 RNF113AO15541 343 aaKnown RBP21.99■■□□□ 1.11
CCDC43-201ENST00000315286 PDE8BO95263 885 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 NTSR2O95665 410 aa21.99■■□□□ 1.11
CCDC43-201ENST00000315286 GZF1Q9H116 711 aaPredicted RBP21.99■■□□□ 1.11
CCDC43-201ENST00000315286 CERKQ8TCT0 537 aa21.98■■□□□ 1.11
CCDC43-201ENST00000315286 U3KPZ7 1027 aaPredicted RBP21.98■■□□□ 1.11
CCDC43-201ENST00000315286 THSD7AQ9UPZ6 1657 aa21.98■■□□□ 1.11
CCDC43-201ENST00000315286 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
CCDC43-201ENST00000315286 LARGE1O95461 756 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 ZNF652Q9Y2D9 606 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 GOLGA6L22H0YM25 854 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 PTMSP20962 102 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 ZAP70P43403 619 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 SEC31BQ9NQW1 1179 aa21.97■■□□□ 1.11
CCDC43-201ENST00000315286 BCORQ6W2J9 1755 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 BTAF1O14981 1849 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 BRD1O95696 1058 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 MEX3CQ5U5Q3 659 aaKnown RBP21.96■■□□□ 1.11
CCDC43-201ENST00000315286 FOXD4L5Q5VV16 416 aaPredicted RBP21.96■■□□□ 1.11
CCDC43-201ENST00000315286 MCTP1Q6DN14 999 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 BLOC1S2Q6QNY1 142 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 CLEC4GQ6UXB4 293 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 PI16Q6UXB8 463 aa21.96■■□□□ 1.11
CCDC43-201ENST00000315286 FOXD4L4Q8WXT5 416 aaPredicted RBP21.96■■□□□ 1.11
CCDC43-201ENST00000315286 SMIM5Q71RC9 77 aa21.95■■□□□ 1.11
CCDC43-201ENST00000315286 HELBQ8NG08 1087 aaPredicted RBP21.95■■□□□ 1.11
CCDC43-201ENST00000315286 GJD4Q96KN9 370 aaPredicted RBP21.95■■□□□ 1.11
CCDC43-201ENST00000315286 CNTNAP4Q9C0A0 1308 aa21.95■■□□□ 1.11
CCDC43-201ENST00000315286 AKAP11Q9UKA4 1901 aa21.95■■□□□ 1.1
CCDC43-201ENST00000315286 LRP5O75197 1615 aa21.95■■□□□ 1.1
CCDC43-201ENST00000315286 MAST3O60307 1309 aa21.95■■□□□ 1.1
CCDC43-201ENST00000315286 MROH5Q6ZUA9 1318 aa21.95■■□□□ 1.1
CCDC43-201ENST00000315286 ABCC12Q96J65 1359 aa21.95■■□□□ 1.1
CCDC43-201ENST00000315286 CYP21A2P08686 494 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 RPS6KB1P23443 525 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 HSPA1LP34931 641 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 MCAMP43121 646 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 SKOR2Q2VWA4 1001 aaPredicted RBP21.94■■□□□ 1.1
CCDC43-201ENST00000315286 ZSCAN31Q96LW9 406 aaPredicted RBP21.94■■□□□ 1.1
CCDC43-201ENST00000315286 TCEANC2Q96MN5 208 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 KRT32Q14532 448 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 CCDC152Q4G0S7 254 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 OSBP2Q969R2 916 aa21.94■■□□□ 1.1
CCDC43-201ENST00000315286 M0R2C6 588 aa21.93■■□□□ 1.1
CCDC43-201ENST00000315286 ME3Q16798 604 aa21.93■■□□□ 1.1
CCDC43-201ENST00000315286 ZNF512BQ96KM6 892 aaPredicted RBP21.93■■□□□ 1.1
CCDC43-201ENST00000315286 MPHOSPH8Q99549 860 aa21.93■■□□□ 1.1
CCDC43-201ENST00000315286 DSCC1Q9BVC3 393 aa21.93■■□□□ 1.1
CCDC43-201ENST00000315286 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.93■■□□□ 1.1
CCDC43-201ENST00000315286 HSP90B1P14625 803 aaKnown RBP21.92■■□□□ 1.1
CCDC43-201ENST00000315286 FGFR2P21802 821 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 PUM3Q15397 648 aaKnown RBP21.92■■□□□ 1.1
CCDC43-201ENST00000315286 CCDC83Q8IWF9 413 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 CHAMP1Q96JM3 812 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 SH2B1Q9NRF2 756 aaPredicted RBP21.92■■□□□ 1.1
CCDC43-201ENST00000315286 TPCN1Q9ULQ1 816 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 NHSQ6T4R5 1651 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 LAMB2P55268 1798 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 HSPD1P10809 573 aaKnown RBP21.92■■□□□ 1.1
CCDC43-201ENST00000315286 LRRFIP1Q32MZ4 808 aaKnown RBP21.92■■□□□ 1.1
CCDC43-201ENST00000315286 LPIN2Q92539 896 aa21.92■■□□□ 1.1
CCDC43-201ENST00000315286 ALDH8A1Q9H2A2 487 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms