RNA–Protein interactions for RNA: ENST00000315266.9

GPHN-201, Transcript of gephyrin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPHN, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-201ENST00000315266 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
GPHN-201ENST00000315266 RXRAP19793 462 aa11.71□□□□□ -0.53
GPHN-201ENST00000315266 ZNF592Q92610 1267 aa11.71□□□□□ -0.53
GPHN-201ENST00000315266 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.537e-7■■■□□ 14.8
GPHN-201ENST00000315266 ZNF830Q96NB3 372 aaPredicted RBP11.71□□□□□ -0.53
GPHN-201ENST00000315266 SNAP23O00161 211 aa11.71□□□□□ -0.53
GPHN-201ENST00000315266 PIGBQ92521 554 aa11.71□□□□□ -0.53
GPHN-201ENST00000315266 USP25Q9UHP3 1055 aa11.71□□□□□ -0.53
GPHN-201ENST00000315266 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.54
GPHN-201ENST00000315266 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.54
GPHN-201ENST00000315266 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.54
GPHN-201ENST00000315266 SYNE4Q8N205 404 aa11.71□□□□□ -0.54
GPHN-201ENST00000315266 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.54
GPHN-201ENST00000315266 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
GPHN-201ENST00000315266 NMIQ13287 307 aaPredicted RBP11.7□□□□□ -0.54
GPHN-201ENST00000315266 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
GPHN-201ENST00000315266 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
GPHN-201ENST00000315266 PLBD2Q8NHP8 589 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 ESYT1Q9BSJ8 1104 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 VPS72Q15906 364 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 BRF1Q92994 677 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
GPHN-201ENST00000315266 ZNF652Q9Y2D9 606 aa11.7□□□□□ -0.54
GPHN-201ENST00000315266 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
GPHN-201ENST00000315266 NAPBQ9H115 298 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 LTBP4Q8N2S1 1624 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 HIP1O00291 1037 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 ME1P48163 572 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 SLC9C2Q5TAH2 1124 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
GPHN-201ENST00000315266 AFF2P51816 1311 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 GCKRQ14397 625 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 TRMT1LQ7Z2T5 733 aaKnown RBP11.69□□□□□ -0.54
GPHN-201ENST00000315266 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
GPHN-201ENST00000315266 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
GPHN-201ENST00000315266 RGPD2P0DJD1 1756 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
GPHN-201ENST00000315266 QTRT2Q9H974 415 aaKnown RBP11.68□□□□□ -0.54
GPHN-201ENST00000315266 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
GPHN-201ENST00000315266 GOLGA6L19H0YKK7 550 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 PUS3Q9BZE2 481 aaKnown RBP11.68□□□□□ -0.54
GPHN-201ENST00000315266 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
GPHN-201ENST00000315266 POLR3DP05423 398 aaPredicted RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 LMBRD1Q9NUN5 540 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 CHMLP26374 656 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 LRRC24Q50LG9 513 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 LMO7Q8WWI1 1683 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 A0A1B0GUL7 405 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 IMMTQ16891 758 aaKnown RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
GPHN-201ENST00000315266 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 NACAP1Q9BZK3 213 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 ATG3Q9NT62 314 aa11.67□□□□□ -0.54
GPHN-201ENST00000315266 ZNF213O14771 459 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 ITGA6P23229 1130 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 HMGB2P26583 209 aaKnown RBP11.66□□□□□ -0.54
GPHN-201ENST00000315266 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
GPHN-201ENST00000315266 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 DZIP1Q86YF9 867 aaKnown RBP11.66□□□□□ -0.54
GPHN-201ENST00000315266 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 STK38Q15208 465 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 SAFBQ15424 915 aaKnown RBP eCLIP11.66□□□□□ -0.54
GPHN-201ENST00000315266 USP48Q86UV5 1035 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
GPHN-201ENST00000315266 CNPY2Q9Y2B0 182 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 COL14A1Q05707 1796 aaKnown RBP11.66□□□□□ -0.54
GPHN-201ENST00000315266 CCDC69A6NI79 296 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 USP5P45974 858 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 ISM2Q6H9L7 571 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 TRIM5Q9C035 493 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 VAT1LQ9HCJ6 419 aa11.66□□□□□ -0.54
GPHN-201ENST00000315266 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
GPHN-201ENST00000315266 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
GPHN-201ENST00000315266 SLC5A1P13866 664 aa11.65□□□□□ -0.54
GPHN-201ENST00000315266 TMEM63CQ9P1W3 806 aa11.65□□□□□ -0.54
GPHN-201ENST00000315266 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
GPHN-201ENST00000315266 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms