RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TCEANC2Q96MN5 208 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 PUF60Q9UHX1 559 aaKnown RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 ANKRD62A6NC57 917 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 HIBADHP31937 336 aaKnown RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 USP8P40818 1118 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 ZYXQ15942 572 aaKnown RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 SEPT7Q16181 437 aaKnown RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 MAP3K11Q16584 847 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 FKBP15Q5T1M5 1219 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
RFFL-201ENST00000315249 CHST3Q7LGC8 479 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 PLBD2Q8NHP8 589 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 TMEM94Q12767 1356 aa15.57■□□□□ 0.08
RFFL-201ENST00000315249 GJB2P29033 226 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 TRAF1Q13077 416 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 HMG20BQ9P0W2 317 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 SPDYE3A6NKU9 549 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 B4DLN1 442 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 PDE8AO60658 829 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 TAF5LO75529 589 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 FGFR1OPO95684 399 aaKnown RBP15.56■□□□□ 0.08
RFFL-201ENST00000315249 MRPL12P52815 198 aaKnown RBP15.56■□□□□ 0.08
RFFL-201ENST00000315249 TTC22Q5TAA0 569 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 TMOD4Q9NZQ9 345 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 AMPD3Q01432 767 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 TCP10Q12799 353 aa15.56■□□□□ 0.08
RFFL-201ENST00000315249 ZNF594Q96JF6 807 aaPredicted RBP15.56■□□□□ 0.08
RFFL-201ENST00000315249 PPIP5K2O43314 1243 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 ZBTB21Q9ULJ3 1066 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 FERMT2Q96AC1 680 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 DENND2AQ9ULE3 1009 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 EPB41L2O43491 1005 aaKnown RBP15.55■□□□□ 0.08
RFFL-201ENST00000315249 TIMM10P62072 90 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 ALDH1B1P30837 517 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 ISM2Q6H9L7 571 aa15.55■□□□□ 0.08
RFFL-201ENST00000315249 TEX35Q5T0J7 233 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 NBPF7P0C2Y1 421 aaPredicted RBP15.54■□□□□ 0.08
RFFL-201ENST00000315249 ARHGAP45Q92619 1136 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 BRF1Q92994 677 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 PRKCSHP14314 528 aaPredicted RBP15.54■□□□□ 0.08
RFFL-201ENST00000315249 H7C1D1 291 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 GNAQP50148 359 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 STXBP4Q6ZWJ1 553 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 GNAT2P19087 354 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 SDSP20132 328 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 DPY19L2Q6NUT2 758 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 NECAB1Q8N987 351 aa15.54■□□□□ 0.08
RFFL-201ENST00000315249 RBM8AQ9Y5S9 174 aaKnown RBP15.54■□□□□ 0.08
RFFL-201ENST00000315249 FSIP1Q8NA03 581 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 ZNF526Q8TF50 670 aaPredicted RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 PUS7Q96PZ0 661 aaKnown RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 TCOF1Q13428 1488 aaKnown RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 KIF20AO95235 890 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 CETN1Q12798 172 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 TBCAO75347 108 aaKnown RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 SETQ01105 290 aaPredicted RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
RFFL-201ENST00000315249 ALG1Q9BT22 464 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 METTL22Q9BUU2 404 aaPredicted RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 IGHDP01880 384 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
RFFL-201ENST00000315249 SAMD9Q5K651 1589 aa15.53■□□□□ 0.08
RFFL-201ENST00000315249 PDE6BP35913 854 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 ERMNQ8TAM6 284 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 TESK2Q96S53 571 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 ZKSCAN3Q9BRR0 538 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 VAMP4O75379 141 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 SUPT20HQ8NEM7 779 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 PDE1AP54750 535 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 PUM3Q15397 648 aaKnown RBP15.52■□□□□ 0.08
RFFL-201ENST00000315249 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.08
RFFL-201ENST00000315249 TNNT1P13805 278 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 ANAPC15P60006 121 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 ADGBQ8N7X0 1667 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 KIF1BO60333 1816 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 BIN1O00499 593 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 CETN2P41208 172 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 NMIQ13287 307 aaPredicted RBP15.52■□□□□ 0.07
RFFL-201ENST00000315249 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 MTIF2P46199 727 aaKnown RBP15.52■□□□□ 0.07
RFFL-201ENST00000315249 CCDC40Q4G0X9 1142 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 Q6ZUG5 572 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 TTC6Q86TZ1 520 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 TCHPQ9BT92 498 aa15.52■□□□□ 0.07
RFFL-201ENST00000315249 G2E3Q7L622 706 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.51■□□□□ 0.07
RFFL-201ENST00000315249 MACROD2A1Z1Q3 448 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 CCDC174Q6PII3 467 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 CENPHQ9H3R5 247 aa15.51■□□□□ 0.07
RFFL-201ENST00000315249 SYCE3A1L190 88 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms