RNA–Protein interactions for RNA: ENST00000313559.9

HMGN2P46-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 1 (best)

Gene HMGN2P46, Length 1,039 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-201ENST00000313559 CITED4Q96RK1 184 aa9.07□□□□□ -0.96
HMGN2P46-201ENST00000313559 NIF3L1Q9GZT8 377 aa9.07□□□□□ -0.96
HMGN2P46-201ENST00000313559 NEO1Q92859 1461 aa9.07□□□□□ -0.96
HMGN2P46-201ENST00000313559 FIGNL1Q6PIW4 674 aa9.06□□□□□ -0.96
HMGN2P46-201ENST00000313559 FBXO33Q7Z6M2 555 aa9.06□□□□□ -0.96
HMGN2P46-201ENST00000313559 VWA5B2Q8N398 1253 aa9.06□□□□□ -0.96
HMGN2P46-201ENST00000313559 FAM13BQ9NYF5 915 aa9.06□□□□□ -0.96
HMGN2P46-201ENST00000313559 RICTORQ6R327 1708 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 CDC14CA4D256 554 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 ERCC3P19447 782 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 KCNQ4P56696 695 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 SETDB2Q96T68 719 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 TMEM63CQ9P1W3 806 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 AKNAQ7Z591 1439 aa9.05□□□□□ -0.96
HMGN2P46-201ENST00000313559 XYLBO75191 536 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 CD33P20138 364 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 USP5P45974 858 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 EHHADHQ08426 723 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 PDE3BQ13370 1112 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 ORC1Q13415 861 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 DMRTB1Q96MA1 342 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 SLC30A3Q99726 388 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 FOXD3Q9UJU5 478 aaPredicted RBP9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 KCNH4Q9UQ05 1017 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 KIAA0556O60303 1618 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 ABCA9Q8IUA7 1624 aa9.04□□□□□ -0.96
HMGN2P46-201ENST00000313559 PLCB3Q01970 1234 aa9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 RAB44Q7Z6P3 723 aaPredicted RBP9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 GSX2Q9BZM3 304 aa9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 IQGAP2Q13576 1575 aa9.03□□□□□ -0.96
HMGN2P46-201ENST00000313559 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 TOM1O60784 492 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 SASH3O75995 380 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 EPB42P16452 691 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 PCSK2P16519 638 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 TARSP26639 723 aaKnown RBP9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 MAPK8P45983 427 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 GIPC2Q8TF65 315 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 GMCL1Q96IK5 515 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 RNF19AQ9NV58 838 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 AMOTL2Q9Y2J4 779 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 CAMSAP1Q5T5Y3 1602 aa9.02□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 RBM47A0AV96 593 aaKnown RBP9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 EGFRP00533 1210 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZNF16P17020 682 aaPredicted RBP9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 RBM25P49756 843 aaKnown RBP9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 CTBSQ01459 385 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 FHOD3Q2V2M9 1422 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 USPL1Q5W0Q7 1092 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 XKR5Q6UX68 686 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZNF438Q7Z4V0 828 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 NANOS1Q8WY41 292 aaKnown RBP9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 ELP3Q9H9T3 547 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 MARK1Q9P0L2 795 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZFATQ9P243 1243 aa9.01□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZFYVE16Q7Z3T8 1539 aa9□□□□□ -0.97
HMGN2P46-201ENST00000313559 FGFR3P22607 806 aa9□□□□□ -0.97
HMGN2P46-201ENST00000313559 SV2AQ7L0J3 742 aa9□□□□□ -0.97
HMGN2P46-201ENST00000313559 NXF1Q9UBU9 619 aaKnown RBP9□□□□□ -0.97
HMGN2P46-201ENST00000313559 ATXN7L1Q9ULK2 861 aaPredicted RBP9□□□□□ -0.97
HMGN2P46-201ENST00000313559 C2CD2LO14523 706 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 RPLP1P05386 114 aaKnown RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 CCINQ13939 588 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 EAPPQ56P03 285 aaPredicted RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 NPM2Q86SE8 214 aaKnown RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 CHRDQ9H2X0 955 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 FNDC3AQ9Y2H6 1198 aaKnown RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 DENND4BO75064 1496 aaPredicted RBP8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 IGF1RP08069 1367 aa8.99□□□□□ -0.97
HMGN2P46-201ENST00000313559 C3P01024 1663 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 PNMA6FA0A0J9YX94 578 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 GAS6Q14393 721 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 COL19A1Q14993 1142 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 ENOX2Q16206 610 aaKnown RBP8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 NLRP13Q86W25 1043 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 TTC16Q8NEE8 873 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 CSRNP1Q96S65 589 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 EFCAB5A4FU69 1503 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 ABCA8O94911 1581 aa8.98□□□□□ -0.97
HMGN2P46-201ENST00000313559 H3BM21 787 aa8.97□□□□□ -0.97
HMGN2P46-201ENST00000313559 EIF1AYO14602 144 aaKnown RBP8.97□□□□□ -0.97
HMGN2P46-201ENST00000313559 NFKB1P19838 968 aa8.97□□□□□ -0.97
HMGN2P46-201ENST00000313559 MMP20O60882 483 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms