RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ITGBL1O95965 494 aaPredicted RBP18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 GPRC5DQ9NZD1 345 aa18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 UTYO14607 1347 aa18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 RAD17O75943 681 aa18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 ITGA6P23229 1130 aa18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 GMPSP49915 693 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 CIAPIN1Q6FI81 312 aa18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 DBNDD1Q9H9R9 158 aa18.56■□□□□ 0.56
PPP1CA-201ENST00000312989 SHTN1A0MZ66 631 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 C6orf229H3BNL8 230 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 RIMBP2O15034 1052 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 UFL1O94874 794 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 MYH3P11055 1940 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 PTPRCP08575 1304 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 XDHP47989 1333 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 ECE2O60344 883 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 GGA1Q9UJY5 639 aa18.55■□□□□ 0.56
PPP1CA-201ENST00000312989 IRS2Q9Y4H2 1338 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 DOK7Q18PE1 504 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 EAPPQ56P03 285 aaPredicted RBP18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 SLC4A10Q6U841 1118 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 EYA3Q99504 573 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 SRCIN1Q9C0H9 1055 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
PPP1CA-201ENST00000312989 SCN9AQ15858 1988 aa18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 PSMD14O00487 310 aa18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 BRPF1P55201 1214 aaPredicted RBP18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 ZBTB12Q9Y330 459 aaPredicted RBP18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 ZNF609O15014 1411 aa18.53■□□□□ 0.56
PPP1CA-201ENST00000312989 MED23Q9ULK4 1368 aa18.52■□□□□ 0.56
PPP1CA-201ENST00000312989 PCNTO95613 3336 aa18.52■□□□□ 0.55
PPP1CA-201ENST00000312989 ATP2B4P23634 1241 aa18.52■□□□□ 0.55
PPP1CA-201ENST00000312989 KLRK1P26718 216 aa18.52■□□□□ 0.55
PPP1CA-201ENST00000312989 LMBR1LQ6UX01 489 aa18.52■□□□□ 0.55
PPP1CA-201ENST00000312989 USP50Q70EL3 339 aaPredicted RBP18.52■□□□□ 0.55
PPP1CA-201ENST00000312989 LMOD1P29536 600 aaPredicted RBP18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 TNIP1Q15025 636 aa18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 TXNRD3Q86VQ6 643 aa18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
PPP1CA-201ENST00000312989 SPEF2Q9C093 1822 aa18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 EGFRP00533 1210 aa18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 VIL1P09327 827 aaKnown RBP18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 CCT4P50991 539 aaKnown RBP18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 ZC3H12CQ9C0D7 883 aaKnown RBP18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 PGAP2Q9UHJ9 254 aa18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 ZNF646O15015 1829 aaPredicted RBP18.5■□□□□ 0.55
PPP1CA-201ENST00000312989 SNAP23O00161 211 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 FMR1Q06787 632 aaKnown RBP eCLIP18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 CHRNDQ07001 517 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 DPF2Q92785 391 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 USP44Q9H0E7 712 aa18.49■□□□□ 0.55
PPP1CA-201ENST00000312989 ANKRD18BA2A2Z9 1011 aa18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 GMLQ99445 158 aa18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 C9orf78Q9NZ63 289 aaPredicted RBP18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
PPP1CA-201ENST00000312989 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
PPP1CA-201ENST00000312989 BICC1Q9H694 974 aaKnown RBP18.47■□□□□ 0.55
PPP1CA-201ENST00000312989 CNOT7Q9UIV1 285 aaKnown RBP18.47■□□□□ 0.55
PPP1CA-201ENST00000312989 NOB1Q9ULX3 412 aaKnown RBP18.47■□□□□ 0.55
PPP1CA-201ENST00000312989 A0A1B0GUL6 1792 aa18.47■□□□□ 0.55
PPP1CA-201ENST00000312989 RPS12P25398 132 aaKnown RBP18.46■□□□□ 0.55
PPP1CA-201ENST00000312989 CLEC11AQ9Y240 323 aa18.46■□□□□ 0.55
PPP1CA-201ENST00000312989 ZNF804BA4D1E1 1349 aa18.46■□□□□ 0.55
PPP1CA-201ENST00000312989 C15orf52Q6ZUT6 534 aaKnown RBP18.45■□□□□ 0.54
PPP1CA-201ENST00000312989 PODNQ7Z5L7 613 aa18.45■□□□□ 0.54
PPP1CA-201ENST00000312989 MPHOSPH8Q99549 860 aa18.45■□□□□ 0.54
PPP1CA-201ENST00000312989 ANKRD2Q9GZV1 360 aa18.45■□□□□ 0.54
PPP1CA-201ENST00000312989 TAF5LO75529 589 aa18.44■□□□□ 0.54
PPP1CA-201ENST00000312989 PSME4Q14997 1843 aa18.44■□□□□ 0.54
PPP1CA-201ENST00000312989 SAMD7Q7Z3H4 446 aa18.44■□□□□ 0.54
PPP1CA-201ENST00000312989 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
PPP1CA-201ENST00000312989 TRAF5O00463 557 aa18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 DACT2Q5SW24 774 aa18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 RSBN1LQ6PCB5 846 aaPredicted RBP18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 CHMP3Q9Y3E7 222 aa18.43■□□□□ 0.54
PPP1CA-201ENST00000312989 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms