RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 PFKFB2O60825 505 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 CIAO1O76071 339 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 HSP90B1P14625 803 aaKnown RBP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 TYRO3Q06418 890 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 RESTQ13127 1097 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 NOLC1Q14978 699 aaKnown RBP eCLIP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 DHX32Q7L7V1 743 aaKnown RBP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 FERMT3Q86UX7 667 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 SMARCC2Q8TAQ2 1214 aa11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 EDC3Q96F86 508 aaKnown RBP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 DNAJC2Q99543 621 aaKnown RBP11.4□□□□□ -0.59
LSMEM1-201ENST00000312849 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 H3BQV1 296 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 PTCD1O75127 700 aaKnown RBP11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 LIG1P18858 919 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 ZMYM1Q5SVZ6 1142 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 CCDC191Q8NCU4 936 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 TCEANC2Q96MN5 208 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 PAG1Q9NWQ8 432 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 TAF6LQ9Y6J9 622 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 SPATA31A3Q5VYP0 1347 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
LSMEM1-201ENST00000312849 CYP21A2P08686 494 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 FGD1P98174 961 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 STK3Q13188 491 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 BRF1Q92994 677 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 CTAGE5O15320 804 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 DNTTIP2Q5QJE6 756 aaKnown RBP11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 ATG9AQ7Z3C6 839 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 MYRIPQ8NFW9 859 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 JARID2Q92833 1246 aaPredicted RBP11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 AGXT2Q9BYV1 514 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
LSMEM1-201ENST00000312849 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 EYA2O00167 538 aa11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 EXOSC10Q01780 885 aaKnown RBP11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 DDX46Q7L014 1031 aaKnown RBP11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 FBXL16Q8N461 479 aa11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 ZNF396Q96N95 335 aaPredicted RBP11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 TFIP11Q9UBB9 837 aaKnown RBP11.37□□□□□ -0.59
LSMEM1-201ENST00000312849 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 RNF113AO15541 343 aaKnown RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 JAK2O60674 1132 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 BICD2Q8TD16 824 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 ZNF274Q96GC6 653 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 NEUROD6Q96NK8 337 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 CTNNA3Q9UI47 895 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 ABCC12Q96J65 1359 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 GOLIM4O00461 696 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 SCRN1Q12765 414 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 CHRNA2Q15822 529 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 FAM173BQ6P4H8 233 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 KIAA1524Q8TCG1 905 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 TTC12Q9H892 705 aaPredicted RBP11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 RCOR1Q9UKL0 485 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
LSMEM1-201ENST00000312849 MYH7P12883 1935 aa11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 NSUN7Q8NE18 718 aaKnown RBP11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 ZNF830Q96NB3 372 aaPredicted RBP11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
LSMEM1-201ENST00000312849 AP5Z1O43299 807 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 GTF2F1P35269 517 aaKnown RBP eCLIP11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 CAMK4Q16566 473 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 ANO6Q4KMQ2 910 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 STOX1Q6ZVD7 989 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 PTPDC1A2A3K4 754 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 E7EWF7 191 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 DTNBO60941 627 aa11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
LSMEM1-201ENST00000312849 CDC25BP30305 580 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms