RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DLC1Q96QB1 1528 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 PTCH1Q13635 1447 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 HOOK3Q86VS8 718 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 ACSBG1Q96GR2 724 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 TMED8Q6PL24 325 aaPredicted RBP9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 COPS6Q7L5N1 327 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 QTRT2Q9H974 415 aaKnown RBP9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 GOLGA6L10A0A0M3HER8 536 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 BCAR3O75815 825 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 EYA1Q99502 592 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 TULP4Q9NRJ4 1543 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 PIK3C2BO00750 1634 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 CNKSR1Q969H4 720 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 FERMT2Q96AC1 680 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 DENND2AQ9ULE3 1009 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 MFSD6Q6ZSS7 791 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 TSG101Q99816 390 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 KIAA0232Q92628 1395 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 JCADQ9P266 1359 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 CAVIN1Q6NZI2 390 aaKnown RBP9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 ESR2Q92731 530 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 SLC12A7Q9Y666 1083 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 FAM98CQ17RN3 349 aaKnown RBP9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 NEURL4Q96JN8 1562 aa9.61□□□□□ -0.87
PCDHB1-201ENST00000306549 APBA3O96018 575 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CALM1P0DP23 149 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CALM2P0DP24 149 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CALM3P0DP25 149 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CABLES1Q8TDN4 633 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 ME1P48163 572 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 PIBF1Q8WXW3 757 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CENPHQ9H3R5 247 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 IQGAP1P46940 1657 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 MINDY4BA8MYZ0 360 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CETN1Q12798 172 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 LRSAM1Q6UWE0 723 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CPS1P31327 1500 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 KIF4AO95239 1232 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 NT5C2P49902 561 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 MYO5BQ9ULV0 1848 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 OVOS2A0A0G2JMS6 1433 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 OVOS2A0A0J9YW53 1432 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 OVOS2Q6IE36 1432 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 PDE8AO60658 829 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 CCDC148Q8NFR7 591 aa9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 TNPO1Q92973 898 aaKnown RBP9.6□□□□□ -0.87
PCDHB1-201ENST00000306549 REREQ9P2R6 1566 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 EIF5P55010 431 aaKnown RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 CWC27Q6UX04 472 aaKnown RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 APBB1IPQ7Z5R6 666 aaPredicted RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 WDR70Q9NW82 654 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 MROH5Q6ZUA9 1318 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 CCDC96Q2M329 555 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 NAA16Q6N069 864 aaPredicted RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 DCCP43146 1447 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 PDRG1Q9NUG6 133 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 WDR17Q8IZU2 1322 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 CCDC192P0DO97 292 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 USP8P40818 1118 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 DEPDC5O75140 1603 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 TRIM27P14373 513 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 FERP16591 822 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 UNC5CLQ8IV45 518 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 TSPY26PQ9H489 355 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 KAT14Q9H8E8 782 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 LDHBP07195 334 aaKnown RBP9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 TTC6Q86TZ1 520 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
PCDHB1-201ENST00000306549 USP37Q86T82 979 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 C1orf115Q9H7X2 142 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 EXOC6BQ9Y2D4 811 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 NASPP49321 788 aaPredicted RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 AMPD3Q01432 767 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 NBPF7P0C2Y1 421 aaPredicted RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 MCM5P33992 734 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 BRDTQ58F21 947 aaPredicted RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 TSNARE1Q96NA8 513 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 DDX23Q9BUQ8 820 aaKnown RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 METTL22Q9BUU2 404 aaPredicted RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 PUM3Q15397 648 aaKnown RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 NCOA7Q8NI08 942 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 NIM1KQ8IY84 436 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 USP32Q8NFA0 1604 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 TSPY2A6NKD2 308 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 CA8P35219 290 aa9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 LARP1BQ659C4 914 aaKnown RBP9.58□□□□□ -0.88
PCDHB1-201ENST00000306549 RNF123Q5XPI4 1314 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms