RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SYT17Q9BSW7 474 aa33.64■■■□□ 2.98
HDAC3-201ENST00000305264 CIAO1O76071 339 aa33.63■■■□□ 2.97
HDAC3-201ENST00000305264 RIPOR2Q9Y4F9 1068 aa33.63■■■□□ 2.97
HDAC3-201ENST00000305264 G3BP1Q13283 466 aaKnown RBP eCLIP33.63■■■□□ 2.97
HDAC3-201ENST00000305264 TTLL6Q8N841 843 aa33.63■■■□□ 2.97
HDAC3-201ENST00000305264 FBXO3Q9UK99 471 aa33.63■■■□□ 2.97
HDAC3-201ENST00000305264 APBB1O00213 710 aa33.62■■■□□ 2.97
HDAC3-201ENST00000305264 OS9Q13438 667 aaPredicted RBP33.62■■■□□ 2.97
HDAC3-201ENST00000305264 PIM2Q9P1W9 311 aa33.62■■■□□ 2.97
HDAC3-201ENST00000305264 KDM2BQ8NHM5 1336 aa33.61■■■□□ 2.97
HDAC3-201ENST00000305264 IL15P40933 162 aaPredicted RBP33.6■■■□□ 2.97
HDAC3-201ENST00000305264 OLFM4Q6UX06 510 aa33.6■■■□□ 2.97
HDAC3-201ENST00000305264 SMC5Q8IY18 1101 aa33.6■■■□□ 2.97
HDAC3-201ENST00000305264 MINPP1Q9UNW1 487 aa33.6■■■□□ 2.97
HDAC3-201ENST00000305264 SASH1O94885 1247 aa33.59■■■□□ 2.97
HDAC3-201ENST00000305264 GCC1Q96CN9 775 aa33.59■■■□□ 2.97
HDAC3-201ENST00000305264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.59■■■□□ 2.97
HDAC3-201ENST00000305264 HSP90AB4PQ58FF6 505 aa33.58■■■□□ 2.97
HDAC3-201ENST00000305264 ZNF219Q9P2Y4 722 aaPredicted RBP33.58■■■□□ 2.97
HDAC3-201ENST00000305264 ATP6V0A2Q9Y487 856 aa33.58■■■□□ 2.97
HDAC3-201ENST00000305264 CHRNDQ07001 517 aa33.58■■■□□ 2.97
HDAC3-201ENST00000305264 TMC4Q7Z404 712 aa33.58■■■□□ 2.97
HDAC3-201ENST00000305264 METTL24Q5JXM2 366 aa33.57■■■□□ 2.96
HDAC3-201ENST00000305264 HELBQ8NG08 1087 aaPredicted RBP33.57■■■□□ 2.96
HDAC3-201ENST00000305264 MROH5Q6ZUA9 1318 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 LTBP1Q14766 1721 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 DALRD3Q5D0E6 543 aaKnown RBP33.56■■■□□ 2.96
HDAC3-201ENST00000305264 TFCP2Q12800 502 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 SP8Q8IXZ3 490 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 VGLL2Q8N8G2 317 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 C7orf43Q8WVR3 580 aa33.56■■■□□ 2.96
HDAC3-201ENST00000305264 RAB11FIP3O75154 756 aa33.55■■■□□ 2.96
HDAC3-201ENST00000305264 ERC1Q8IUD2 1116 aa33.55■■■□□ 2.96
HDAC3-201ENST00000305264 RHPN1Q8TCX5 695 aa33.55■■■□□ 2.96
HDAC3-201ENST00000305264 TAF5LO75529 589 aa33.54■■■□□ 2.96
HDAC3-201ENST00000305264 CENPQQ7L2Z9 268 aaPredicted RBP33.54■■■□□ 2.96
HDAC3-201ENST00000305264 C21orf2O43822 256 aa33.53■■■□□ 2.96
HDAC3-201ENST00000305264 KIF1BPQ96EK5 621 aa33.53■■■□□ 2.96
HDAC3-201ENST00000305264 ARFGEF1Q9Y6D6 1849 aa33.53■■■□□ 2.96
HDAC3-201ENST00000305264 SMARCA5O60264 1052 aaPredicted RBP33.52■■■□□ 2.96
HDAC3-201ENST00000305264 CEP126Q9P2H0 1117 aa33.52■■■□□ 2.96
HDAC3-201ENST00000305264 GPSM2P81274 684 aa33.52■■■□□ 2.96
HDAC3-201ENST00000305264 LRRCC1Q9C099 1032 aa33.52■■■□□ 2.96
HDAC3-201ENST00000305264 IL1RAPL2Q9NP60 686 aa33.52■■■□□ 2.96
HDAC3-201ENST00000305264 BCS1LQ9Y276 419 aa33.52■■■□□ 2.96
HDAC3-201ENST00000305264 SNED1Q8TER0 1413 aa33.51■■■□□ 2.95
HDAC3-201ENST00000305264 BCL11AQ9H165 835 aa33.51■■■□□ 2.95
HDAC3-201ENST00000305264 DUOX1Q9NRD9 1551 aa33.5■■■□□ 2.95
HDAC3-201ENST00000305264 SNAP23O00161 211 aa33.5■■■□□ 2.95
HDAC3-201ENST00000305264 PDE8BO95263 885 aa33.5■■■□□ 2.95
HDAC3-201ENST00000305264 ANKRD45Q5TZF3 282 aa33.5■■■□□ 2.95
HDAC3-201ENST00000305264 ANKIB1Q9P2G1 1089 aa33.5■■■□□ 2.95
HDAC3-201ENST00000305264 WTIPA6NIX2 430 aaPredicted RBP33.49■■■□□ 2.95
HDAC3-201ENST00000305264 ANKRD2Q9GZV1 360 aa33.49■■■□□ 2.95
HDAC3-201ENST00000305264 NSFL1CQ9UNZ2 370 aaKnown RBP33.49■■■□□ 2.95
HDAC3-201ENST00000305264 XDHP47989 1333 aa33.49■■■□□ 2.95
HDAC3-201ENST00000305264 ZNF609O15014 1411 aa33.48■■■□□ 2.95
HDAC3-201ENST00000305264 TMX4Q9H1E5 349 aaPredicted RBP33.47■■■□□ 2.95
HDAC3-201ENST00000305264 UTRNP46939 3433 aa33.47■■■□□ 2.95
HDAC3-201ENST00000305264 NUCB1Q02818 461 aa33.46■■■□□ 2.95
HDAC3-201ENST00000305264 PODXL2Q9NZ53 605 aa33.46■■■□□ 2.95
HDAC3-201ENST00000305264 ARAP2Q8WZ64 1704 aa33.45■■■□□ 2.95
HDAC3-201ENST00000305264 PUM3Q15397 648 aaKnown RBP33.45■■■□□ 2.94
HDAC3-201ENST00000305264 CCDC93Q567U6 631 aa33.45■■■□□ 2.94
HDAC3-201ENST00000305264 TNNI3KQ59H18 835 aa33.45■■■□□ 2.94
HDAC3-201ENST00000305264 MPNDQ8N594 471 aa33.45■■■□□ 2.94
HDAC3-201ENST00000305264 FPGT-TNNI3KV9GXZ4 949 aa33.45■■■□□ 2.94
HDAC3-201ENST00000305264 CC2D2BQ6DHV5 1058 aa33.44■■■□□ 2.94
HDAC3-201ENST00000305264 FGFR2P21802 821 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 ATP2B3Q16720 1220 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 DPP8Q6V1X1 898 aaPredicted RBP33.43■■■□□ 2.94
HDAC3-201ENST00000305264 EAF2Q96CJ1 260 aaPredicted RBP33.43■■■□□ 2.94
HDAC3-201ENST00000305264 LNPKQ9C0E8 428 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 FER1L6Q2WGJ9 1857 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 UFL1O94874 794 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 GPR108Q9NPR9 543 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 POLLQ9UGP5 575 aa33.43■■■□□ 2.94
HDAC3-201ENST00000305264 CHD1LQ86WJ1 897 aa33.42■■■□□ 2.94
HDAC3-201ENST00000305264 CLASRPQ8N2M8 674 aaKnown RBP33.42■■■□□ 2.94
HDAC3-201ENST00000305264 GGA1Q9UJY5 639 aa33.42■■■□□ 2.94
HDAC3-201ENST00000305264 ZNF804BA4D1E1 1349 aa33.42■■■□□ 2.94
HDAC3-201ENST00000305264 A0A1B0GUL7 405 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 KCNJ4P48050 445 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 TIMM10P62072 90 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 SOGA3Q5TF21 947 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 AACSQ86V21 672 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 TBC1D16Q8TBP0 767 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 GPR101Q96P66 508 aaPredicted RBP33.41■■■□□ 2.94
HDAC3-201ENST00000305264 AKAP2Q9Y2D5 859 aa33.41■■■□□ 2.94
HDAC3-201ENST00000305264 KLRK1P26718 216 aa33.4■■■□□ 2.94
HDAC3-201ENST00000305264 UBE4AQ14139 1066 aa33.4■■■□□ 2.94
HDAC3-201ENST00000305264 TLR7Q9NYK1 1049 aaKnown RBP33.4■■■□□ 2.94
HDAC3-201ENST00000305264 ZBTB47Q9UFB7 747 aaPredicted RBP33.4■■■□□ 2.94
HDAC3-201ENST00000305264 LEMD3Q9Y2U8 911 aa33.4■■■□□ 2.94
HDAC3-201ENST00000305264 ATP2B4P23634 1241 aa33.4■■■□□ 2.94
HDAC3-201ENST00000305264 LPIN2Q92539 896 aa33.4■■■□□ 2.94
HDAC3-201ENST00000305264 YBX3P16989 372 aaKnown RBP eCLIP33.39■■■□□ 2.943e-8■■□□□ 12.1
HDAC3-201ENST00000305264 PELP1Q8IZL8 1130 aaKnown RBP33.39■■■□□ 2.94
HDAC3-201ENST00000305264 CCDC8Q9H0W5 538 aaPredicted RBP33.39■■■□□ 2.94
HDAC3-201ENST00000305264 C16orf71Q8IYS4 520 aaPredicted RBP33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms