RNA–Protein interactions for RNA: ENST00000302763.11

CTNNA1-201, Transcript of catenin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNA1, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-201ENST00000302763 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 CAVIN1Q6NZI2 390 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 SMIM5Q71RC9 77 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 C9orf78Q9NZ63 289 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 USP21Q9UK80 565 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 PSME4Q14997 1843 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 HSP90B1P14625 803 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 NEK4P51957 841 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 TTC14Q96N46 770 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 ST3GAL1Q11201 340 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 SLC51AQ86UW1 340 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
CTNNA1-201ENST00000302763 ZBTB22O15209 634 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 ATP5JP18859 108 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 HSPA4P34932 840 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 RAD50Q92878 1312 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 TM4SF1P30408 202 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 FAM89AQ96GI7 184 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 KCNQ4P56696 695 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 GREM2Q9H772 168 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 ADAMTSL1Q8N6G6 1762 aa9.03□□□□□ -0.96
CTNNA1-201ENST00000302763 VPS37CA5D8V6 355 aaPredicted RBP9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 REC8O95072 547 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 PTH1RQ03431 593 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 NECTIN1Q15223 517 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 HAUS7Q99871 368 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 TCHHQ07283 1943 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.96
CTNNA1-201ENST00000302763 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 STARD3NLO95772 234 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 EDC3Q96F86 508 aaKnown RBP9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 ECHDC1Q9NTX5 307 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 CTSWP56202 376 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 SCARF1Q14162 830 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 GORABQ5T7V8 394 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 FBXW7Q969H0 707 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 DIAPH3Q9NSV4 1193 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 FBXO3Q9UK99 471 aa9.02□□□□□ -0.97
CTNNA1-201ENST00000302763 A0A0D9SFI3 127 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 MCM4P33991 863 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 CLEC17AQ6ZS10 378 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 ZNF512BQ96KM6 892 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 DBNDD2Q9BQY9 259 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 AK7Q96M32 723 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 WTIPA6NIX2 430 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 EYA2O00167 538 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 ERC2O15083 957 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 NPHP1O15259 732 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 NEXNQ0ZGT2 675 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 DZIP3Q86Y13 1208 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 ERC1Q8IUD2 1116 aa9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
CTNNA1-201ENST00000302763 ATP6V1AP38606 617 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 HSP90AB4PQ58FF6 505 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 SLC10A5Q5PT55 438 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 FAM227BQ96M60 508 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 UPF3BQ9BZI7 483 aaKnown RBP9□□□□□ -0.97
CTNNA1-201ENST00000302763 ZDHHC9Q9Y397 364 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 NDUFB9Q9Y6M9 179 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 SIPA1L1O43166 1804 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 KIAA2012Q0VF49 1180 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 CCDC8Q9H0W5 538 aaPredicted RBP9□□□□□ -0.97
CTNNA1-201ENST00000302763 SIL1Q9H173 461 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 TBC1D2BQ9UPU7 963 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 MAP4K1Q92918 833 aa9□□□□□ -0.97
CTNNA1-201ENST00000302763 KDM4AO75164 1064 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 GLRX3O76003 335 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 ADORA1P30542 326 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 CLEC4GQ6UXB4 293 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 AACSQ86V21 672 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 TCRBV5S4A2TA0A5A2 114 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 CUL4AQ13619 759 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 NGLY1Q96IV0 654 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 SH3TC1Q8TE82 1336 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 A0A0G2JLW4 131 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 IFIT2P09913 472 aaKnown RBP8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 NASPP49321 788 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 HSP90AA2PQ14568 343 aaPredicted RBP8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 TAF7LQ5H9L4 462 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 TBC1D9BQ66K14 1250 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 TICAM2Q86XR7 235 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 SNX14Q9Y5W7 946 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 ZNF804BA4D1E1 1349 aa8.99□□□□□ -0.97
CTNNA1-201ENST00000302763 GNL2Q13823 731 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-201ENST00000302763 SYAP1Q96A49 352 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-201ENST00000302763 GPATCH3Q96I76 525 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms