RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
RPSA-201ENST00000301821 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
RPSA-201ENST00000301821 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
RPSA-201ENST00000301821 COL4A1P02462 1669 aa13.39□□□□□ -0.27
RPSA-201ENST00000301821 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
RPSA-201ENST00000301821 GPSM2P81274 684 aa13.38□□□□□ -0.27
RPSA-201ENST00000301821 CTU1Q7Z7A3 348 aaKnown RBP13.38□□□□□ -0.27
RPSA-201ENST00000301821 SULF1Q8IWU6 871 aa13.38□□□□□ -0.27
RPSA-201ENST00000301821 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
RPSA-201ENST00000301821 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
RPSA-201ENST00000301821 POLR2AP24928 1970 aaKnown RBP13.38□□□□□ -0.27
RPSA-201ENST00000301821 ASTN2O75129 1339 aaPredicted RBP13.38□□□□□ -0.27
RPSA-201ENST00000301821 DDX10Q13206 875 aaKnown RBP13.37□□□□□ -0.27
RPSA-201ENST00000301821 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
RPSA-201ENST00000301821 CDCA5Q96FF9 252 aa13.37□□□□□ -0.27
RPSA-201ENST00000301821 EYA3Q99504 573 aa13.37□□□□□ -0.27
RPSA-201ENST00000301821 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
RPSA-201ENST00000301821 RTL5Q5HYW3 569 aaPredicted RBP13.36□□□□□ -0.27
RPSA-201ENST00000301821 RASAL3Q86YV0 1011 aa13.36□□□□□ -0.27
RPSA-201ENST00000301821 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
RPSA-201ENST00000301821 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
RPSA-201ENST00000301821 RIPK4P57078 832 aa13.35□□□□□ -0.27
RPSA-201ENST00000301821 FAM89AQ96GI7 184 aa13.35□□□□□ -0.27
RPSA-201ENST00000301821 PNNQ9H307 717 aaKnown RBP13.35□□□□□ -0.27
RPSA-201ENST00000301821 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
RPSA-201ENST00000301821 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
RPSA-201ENST00000301821 ATP5J2-PTCD1G3V325 749 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 G3V3G9 751 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
RPSA-201ENST00000301821 KRT24Q2M2I5 525 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 DCAF8Q5TAQ9 597 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
RPSA-201ENST00000301821 TBC1D16Q8TBP0 767 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
RPSA-201ENST00000301821 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
RPSA-201ENST00000301821 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.28
RPSA-201ENST00000301821 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
RPSA-201ENST00000301821 UFL1O94874 794 aa13.32□□□□□ -0.28
RPSA-201ENST00000301821 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
RPSA-201ENST00000301821 SCARF1Q14162 830 aa13.32□□□□□ -0.28
RPSA-201ENST00000301821 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
RPSA-201ENST00000301821 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
RPSA-201ENST00000301821 ISCA1Q9BUE6 129 aa13.32□□□□□ -0.28
RPSA-201ENST00000301821 BABAM1Q9NWV8 329 aa13.32□□□□□ -0.28
RPSA-201ENST00000301821 SCAF8Q9UPN6 1271 aaKnown RBP13.32□□□□□ -0.28
RPSA-201ENST00000301821 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
RPSA-201ENST00000301821 IRS4O14654 1257 aaPredicted RBP13.31□□□□□ -0.28
RPSA-201ENST00000301821 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
RPSA-201ENST00000301821 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 RALBP1Q15311 655 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 MOB2Q70IA6 237 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
RPSA-201ENST00000301821 LAS1LQ9Y4W2 734 aaKnown RBP13.31□□□□□ -0.28
RPSA-201ENST00000301821 PSME4Q14997 1843 aa13.3□□□□□ -0.28
RPSA-201ENST00000301821 FKBP1BP68106 108 aa13.3□□□□□ -0.28
RPSA-201ENST00000301821 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
RPSA-201ENST00000301821 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
RPSA-201ENST00000301821 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
RPSA-201ENST00000301821 GGA1Q9UJY5 639 aa13.3□□□□□ -0.28
RPSA-201ENST00000301821 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
RPSA-201ENST00000301821 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
RPSA-201ENST00000301821 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
RPSA-201ENST00000301821 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
RPSA-201ENST00000301821 PKN2Q16513 984 aaKnown RBP13.29□□□□□ -0.28
RPSA-201ENST00000301821 AGBL3Q8NEM8 1001 aa13.29□□□□□ -0.28
RPSA-201ENST00000301821 MYOZ2Q9NPC6 264 aa13.29□□□□□ -0.28
RPSA-201ENST00000301821 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
RPSA-201ENST00000301821 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
RPSA-201ENST00000301821 ZNF609O15014 1411 aa13.29□□□□□ -0.28
RPSA-201ENST00000301821 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 ABCB7O75027 752 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 USP17L8P0C7I0 530 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
RPSA-201ENST00000301821 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 PITPNM2Q9BZ72 1349 aa13.28□□□□□ -0.28
RPSA-201ENST00000301821 CCDC85AQ96PX6 553 aaPredicted RBP13.27□□□□□ -0.29
RPSA-201ENST00000301821 DBF4Q9UBU7 674 aaPredicted RBP13.27□□□□□ -0.29
RPSA-201ENST00000301821 GPR25O00155 361 aa13.26□□□□□ -0.29
RPSA-201ENST00000301821 CHL1O00533 1208 aa13.26□□□□□ -0.29
RPSA-201ENST00000301821 FBXO46Q6PJ61 603 aaPredicted RBP13.26□□□□□ -0.29
RPSA-201ENST00000301821 XDHP47989 1333 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 NBPF9Q3BBW0 867 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 ZBTB38Q8NAP3 1195 aaPredicted RBP13.25□□□□□ -0.29
RPSA-201ENST00000301821 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 GMLQ99445 158 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 HYPKQ9NX55 129 aa13.25□□□□□ -0.29
RPSA-201ENST00000301821 HOXB7P09629 217 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 NF2P35240 595 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
RPSA-201ENST00000301821 PRKG1Q13976 671 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms