RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 CCDC47Q96A33 483 aaKnown RBP10.76□□□□□ -0.69
MMP3-201ENST00000299855 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
MMP3-201ENST00000299855 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
MMP3-201ENST00000299855 PIK3R4Q99570 1358 aa10.76□□□□□ -0.69
MMP3-201ENST00000299855 ALKQ9UM73 1620 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 SCAMP3O14828 347 aaKnown RBP10.75□□□□□ -0.69
MMP3-201ENST00000299855 KIF20AO95235 890 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 HSPA1LP34931 641 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 FBXO33Q7Z6M2 555 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 NGDNQ8NEJ9 315 aaKnown RBP10.75□□□□□ -0.69
MMP3-201ENST00000299855 TSC1Q92574 1164 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 FAM210AQ96ND0 272 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 ODF2LQ9ULJ1 636 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 KCNA6P17658 529 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 PDE6BP35913 854 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 PRPF38AQ8NAV1 312 aaKnown RBP10.75□□□□□ -0.69
MMP3-201ENST00000299855 SLC43A3Q8NBI5 491 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
MMP3-201ENST00000299855 PPP1R12CQ9BZL4 782 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
MMP3-201ENST00000299855 NLRP2Q9NX02 1062 aa10.75□□□□□ -0.69
MMP3-201ENST00000299855 TMEM131LA2VDJ0 1609 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 ZFYVE9O95405 1425 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 ST18O60284 1047 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 CASQ1P31415 396 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 KIAA2012Q0VF49 1180 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 TSR2Q969E8 191 aaKnown RBP10.74□□□□□ -0.69
MMP3-201ENST00000299855 LZTS1Q9Y250 596 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 KIF24Q5T7B8 1368 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 SOWAHDA6NJG2 315 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 NPHP1O15259 732 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 VPS72Q15906 364 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
MMP3-201ENST00000299855 SLC26A8Q96RN1 970 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 USP26Q9BXU7 913 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 SLC12A5Q9H2X9 1139 aa10.74□□□□□ -0.69
MMP3-201ENST00000299855 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 PRPF40AO75400 957 aaKnown RBP10.73□□□□□ -0.69
MMP3-201ENST00000299855 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
MMP3-201ENST00000299855 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 FAM184AQ8NB25 1140 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 GPT2Q8TD30 523 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 SLC39A13Q96H72 371 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
MMP3-201ENST00000299855 SLC20A2Q08357 652 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 LMNTD2Q8IXW0 634 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 SYAP1Q96A49 352 aaPredicted RBP10.72□□□□□ -0.69
MMP3-201ENST00000299855 QRICH2Q9H0J4 1663 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 LETM1O95202 739 aaPredicted RBP10.72□□□□□ -0.69
MMP3-201ENST00000299855 RBL2Q08999 1139 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 LONRF1Q17RB8 773 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 INTS3Q68E01 1043 aaKnown RBP10.72□□□□□ -0.69
MMP3-201ENST00000299855 CCDC89Q8N998 374 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 RNF217Q8TC41 542 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
MMP3-201ENST00000299855 TMEM63CQ9P1W3 806 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 PTCH1Q13635 1447 aa10.72□□□□□ -0.69
MMP3-201ENST00000299855 XIRP1Q702N8 1843 aaKnown RBP10.71□□□□□ -0.69
MMP3-201ENST00000299855 DYTNA2CJ06 578 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
MMP3-201ENST00000299855 MTA2O94776 668 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 GNALP38405 381 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 CD151P48509 253 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 MCM2P49736 904 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 RAPGEF1Q13905 1077 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 ILDR2Q71H61 639 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 PIBF1Q8WXW3 757 aa10.71□□□□□ -0.69
MMP3-201ENST00000299855 TMEM94Q12767 1356 aa10.71□□□□□ -0.7
MMP3-201ENST00000299855 GOLGA6L6A8MZA4 724 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 FAM160A1Q05DH4 1040 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 HSP90B2PQ58FF3 399 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 NUTM2DQ5VT03 806 aaPredicted RBP10.7□□□□□ -0.7
MMP3-201ENST00000299855 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 CHPFQ8IZ52 775 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 CHCHD4Q8N4Q1 142 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 BORCS6Q96GS4 357 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 C14orf93Q9H972 538 aaKnown RBP10.7□□□□□ -0.7
MMP3-201ENST00000299855 ACAD8Q9UKU7 415 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 KCNA2P16389 499 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 NAT1P18440 290 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 RELTQ969Z4 430 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 APBA2Q99767 749 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.7□□□□□ -0.7
MMP3-201ENST00000299855 DCTPP1Q9H773 170 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 SUDS3Q9H7L9 328 aaPredicted RBP10.7□□□□□ -0.7
MMP3-201ENST00000299855 TYW1Q9NV66 732 aaKnown RBP10.7□□□□□ -0.7
MMP3-201ENST00000299855 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 CHMP3Q9Y3E7 222 aa10.7□□□□□ -0.7
MMP3-201ENST00000299855 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
MMP3-201ENST00000299855 CLK1P49759 484 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms