RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 MAP3K15Q6ZN16 1313 aa11.95□□□□□ -0.5
GABRB3-201ENST00000299267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 RXRBP28702 533 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 RPS8P62241 208 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 CAMK4Q16566 473 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 NCOA7Q8NI08 942 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 C8orf76Q96K31 380 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 PRDM1O75626 825 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 MBD4O95243 580 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 HOMER1Q86YM7 354 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 ZNF396Q96N95 335 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 SEC62Q99442 399 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 CDKL5O76039 1030 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 ZFYP08048 801 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 GYG1P46976 350 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 CRNKL1Q9BZJ0 848 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 TLR7Q9NYK1 1049 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 GSPT1P15170 499 aaKnown RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 CTSWP56202 376 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 Q6ZUG5 572 aa11.94□□□□□ -0.5
GABRB3-201ENST00000299267 ZBTB38Q8NAP3 1195 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 ORC3Q9UBD5 711 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-201ENST00000299267 HIBADHP31937 336 aaKnown RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 USP26Q9BXU7 913 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 KDRP35968 1356 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
GABRB3-201ENST00000299267 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 PANK2Q9BZ23 570 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 ZHX3Q9H4I2 956 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 ARMT1Q9H993 441 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 KIF24Q5T7B8 1368 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
GABRB3-201ENST00000299267 PREX1Q8TCU6 1659 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 BCAMP50895 628 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 MCM5P33992 734 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 MBD3O95983 291 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 OGFOD1Q8N543 542 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SLC26A6Q9BXS9 759 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 POLD1P28340 1107 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 ADORA1P30542 326 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 IL6STP40189 918 aaPredicted RBP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 APOBRQ0VD83 1088 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 DHX8Q14562 1220 aaKnown RBP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 EPHA10Q5JZY3 1008 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 ZNF287Q9HBT7 754 aa11.92□□□□□ -0.5
GABRB3-201ENST00000299267 SAP30BPQ9UHR5 308 aaKnown RBP11.92□□□□□ -0.5
GABRB3-201ENST00000299267 USP31Q70CQ4 1352 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 AK2P54819 239 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 PDE4BQ07343 736 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 CATIPQ7Z7H3 387 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 HOOK1Q9UJC3 728 aaKnown RBP11.91□□□□□ -0.5
GABRB3-201ENST00000299267 PTCH1Q13635 1447 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
GABRB3-201ENST00000299267 METAP2P50579 478 aaKnown RBP eCLIP11.91□□□□□ -0.5
GABRB3-201ENST00000299267 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
GABRB3-201ENST00000299267 BAG6P46379 1132 aa11.91□□□□□ -0.5
GABRB3-201ENST00000299267 PRC1O43663 620 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 LPIN2Q92539 896 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 RBM17Q96I25 401 aaKnown RBP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 ANKRD2Q9GZV1 360 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 WTAPQ15007 396 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 CDK5RAP3Q96JB5 506 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 FEZ1Q99689 392 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 TNMDQ9H2S6 317 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 CDC42BPGQ6DT37 1551 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 STX6O43752 255 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
GABRB3-201ENST00000299267 CCDC47Q96A33 483 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms