RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
NXF1-201ENST00000294172 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
NXF1-201ENST00000294172 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
NXF1-201ENST00000294172 STX6O43752 255 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 ITGA6P23229 1130 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 TTC39AQ5SRH9 613 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 GDPD2Q9HCC8 539 aa16.71■□□□□ 0.27
NXF1-201ENST00000294172 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
NXF1-201ENST00000294172 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
NXF1-201ENST00000294172 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 PALLDQ8WX93 1383 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 CTSWP56202 376 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 KRT32Q14532 448 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
NXF1-201ENST00000294172 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
NXF1-201ENST00000294172 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
NXF1-201ENST00000294172 LRP6O75581 1613 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 ATP6V1AP38606 617 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
NXF1-201ENST00000294172 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 CYP21A2P08686 494 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 NEK1Q96PY6 1258 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 CNNM1Q9NRU3 951 aa16.69■□□□□ 0.26
NXF1-201ENST00000294172 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
NXF1-201ENST00000294172 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
NXF1-201ENST00000294172 RNF113AO15541 343 aaKnown RBP16.68■□□□□ 0.26
NXF1-201ENST00000294172 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
NXF1-201ENST00000294172 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
NXF1-201ENST00000294172 ERVV-1B6SEH8 477 aa16.68■□□□□ 0.26
NXF1-201ENST00000294172 STK3Q13188 491 aa16.68■□□□□ 0.26
NXF1-201ENST00000294172 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
NXF1-201ENST00000294172 DOT1LQ8TEK3 1739 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.67■□□□□ 0.26
NXF1-201ENST00000294172 RIPOR2Q9Y4F9 1068 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 UBN2Q6ZU65 1347 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 MBD3O95983 291 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 SCARF1Q14162 830 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 INTS5Q6P9B9 1019 aaKnown RBP16.67■□□□□ 0.26
NXF1-201ENST00000294172 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 TMEM63CQ9P1W3 806 aa16.67■□□□□ 0.26
NXF1-201ENST00000294172 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 LTBP4Q8N2S1 1624 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 LOC102724428A0A0B4J2F2 783 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
NXF1-201ENST00000294172 PDE8AO60658 829 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 F13A1P00488 732 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
NXF1-201ENST00000294172 EIF5P55010 431 aaKnown RBP16.66■□□□□ 0.26
NXF1-201ENST00000294172 SIK1P57059 783 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 ZNF445P59923 1031 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 TPRNQ4KMQ1 711 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 MAST3O60307 1309 aa16.66■□□□□ 0.26
NXF1-201ENST00000294172 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
NXF1-201ENST00000294172 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 PI16Q6UXB8 463 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 ALDH8A1Q9H2A2 487 aaPredicted RBP16.65■□□□□ 0.26
NXF1-201ENST00000294172 M0R2C6 588 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
NXF1-201ENST00000294172 ZAP70P43403 619 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 FGD1P98174 961 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 Q6ZUG5 572 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
NXF1-201ENST00000294172 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
NXF1-201ENST00000294172 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
NXF1-201ENST00000294172 STOX1Q6ZVD7 989 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 OSBP2Q969R2 916 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 DSCC1Q9BVC3 393 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 WNK3Q9BYP7 1800 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
NXF1-201ENST00000294172 ITPK1Q13572 414 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 ATP6V1DQ9Y5K8 247 aa16.64■□□□□ 0.25
NXF1-201ENST00000294172 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
NXF1-201ENST00000294172 SYCE3A1L190 88 aa16.63■□□□□ 0.25
NXF1-201ENST00000294172 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
NXF1-201ENST00000294172 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
NXF1-201ENST00000294172 KCNQ2O43526 872 aa16.63■□□□□ 0.25
NXF1-201ENST00000294172 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
NXF1-201ENST00000294172 NUP98P52948 1817 aa16.62■□□□□ 0.25
NXF1-201ENST00000294172 FIBPO43427 364 aa16.62■□□□□ 0.25
NXF1-201ENST00000294172 TOM1O60784 492 aa16.62■□□□□ 0.25
NXF1-201ENST00000294172 HELBQ8NG08 1087 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms