RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 CEP126Q9P2H0 1117 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 RPAP1Q9BWH6 1393 aaPredicted RBP17.65■□□□□ 0.42
TTC9C-201ENST00000294161 TAF5LO75529 589 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 DNAJC10Q8IXB1 793 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 ARXQ96QS3 562 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 MAP3K15Q6ZN16 1313 aa17.65■□□□□ 0.42
TTC9C-201ENST00000294161 CSPP1Q1MSJ5 1256 aa17.64■□□□□ 0.41
TTC9C-201ENST00000294161 ZBTB38Q8NAP3 1195 aaPredicted RBP17.64■□□□□ 0.41
TTC9C-201ENST00000294161 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
TTC9C-201ENST00000294161 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
TTC9C-201ENST00000294161 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 ADCK5Q3MIX3 580 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 CAVIN1Q6NZI2 390 aaKnown RBP17.63■□□□□ 0.41
TTC9C-201ENST00000294161 GIGYF2Q6Y7W6 1299 aaKnown RBP17.63■□□□□ 0.41
TTC9C-201ENST00000294161 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
TTC9C-201ENST00000294161 PAG1Q9NWQ8 432 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
TTC9C-201ENST00000294161 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
TTC9C-201ENST00000294161 TAF7LQ5H9L4 462 aa17.63■□□□□ 0.41
TTC9C-201ENST00000294161 TNS1Q9HBL0 1735 aaKnown RBP17.62■□□□□ 0.41
TTC9C-201ENST00000294161 STX6O43752 255 aa17.62■□□□□ 0.41
TTC9C-201ENST00000294161 RPS6KB1P23443 525 aa17.62■□□□□ 0.41
TTC9C-201ENST00000294161 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
TTC9C-201ENST00000294161 FOXD4L5Q5VV16 416 aaPredicted RBP17.62■□□□□ 0.41
TTC9C-201ENST00000294161 FOXD4L4Q8WXT5 416 aaPredicted RBP17.62■□□□□ 0.41
TTC9C-201ENST00000294161 ZNF609O15014 1411 aa17.62■□□□□ 0.41
TTC9C-201ENST00000294161 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
TTC9C-201ENST00000294161 PDCP20941 246 aa17.61■□□□□ 0.41
TTC9C-201ENST00000294161 IFIT5Q13325 482 aaKnown RBP17.61■□□□□ 0.41
TTC9C-201ENST00000294161 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
TTC9C-201ENST00000294161 CSF1RP07333 972 aa17.61■□□□□ 0.41
TTC9C-201ENST00000294161 HMGB1P09429 215 aaKnown RBP17.61■□□□□ 0.41
TTC9C-201ENST00000294161 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
TTC9C-201ENST00000294161 GORABQ5T7V8 394 aa17.61■□□□□ 0.41
TTC9C-201ENST00000294161 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
TTC9C-201ENST00000294161 A0A1B0GUL7 405 aa17.6■□□□□ 0.41
TTC9C-201ENST00000294161 PHF14O94880 888 aa17.6■□□□□ 0.41
TTC9C-201ENST00000294161 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
TTC9C-201ENST00000294161 CPA1P15085 419 aa17.6■□□□□ 0.41
TTC9C-201ENST00000294161 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
TTC9C-201ENST00000294161 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
TTC9C-201ENST00000294161 EDC3Q96F86 508 aaKnown RBP17.6■□□□□ 0.41
TTC9C-201ENST00000294161 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 APBA3O96018 575 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 SYT1P21579 422 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 ITPK1Q13572 414 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 TMEM87AQ8NBN3 555 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 GPT2Q8TD30 523 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 ABCC12Q96J65 1359 aa17.59■□□□□ 0.41
TTC9C-201ENST00000294161 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 GOLIM4O00461 696 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 ZFYP08048 801 aaPredicted RBP17.58■□□□□ 0.41
TTC9C-201ENST00000294161 GJB2P29033 226 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 SIK1P57059 783 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 TIMM10P62072 90 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 NEK1Q96PY6 1258 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.41
TTC9C-201ENST00000294161 F13A1P00488 732 aa17.58■□□□□ 0.4
TTC9C-201ENST00000294161 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
TTC9C-201ENST00000294161 IL6STP40189 918 aaPredicted RBP17.58■□□□□ 0.4
TTC9C-201ENST00000294161 TTC39AQ5SRH9 613 aa17.58■□□□□ 0.4
TTC9C-201ENST00000294161 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
TTC9C-201ENST00000294161 CHMP4CQ96CF2 233 aa17.58■□□□□ 0.4
TTC9C-201ENST00000294161 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.4
TTC9C-201ENST00000294161 LY75O60449 1722 aa17.57■□□□□ 0.4
TTC9C-201ENST00000294161 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
TTC9C-201ENST00000294161 NASPP49321 788 aaPredicted RBP17.57■□□□□ 0.4
TTC9C-201ENST00000294161 ME3Q16798 604 aa17.57■□□□□ 0.4
TTC9C-201ENST00000294161 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
TTC9C-201ENST00000294161 PANK2Q9BZ23 570 aa17.57■□□□□ 0.4
TTC9C-201ENST00000294161 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 ZMYM1Q5SVZ6 1142 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 AK7Q96M32 723 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 TPCN1Q9ULQ1 816 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 CCDC173Q0VFZ6 552 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
TTC9C-201ENST00000294161 LARP6Q9BRS8 491 aaKnown RBP17.56■□□□□ 0.4
TTC9C-201ENST00000294161 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
TTC9C-201ENST00000294161 LARGE1O95461 756 aa17.55■□□□□ 0.4
TTC9C-201ENST00000294161 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
TTC9C-201ENST00000294161 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
TTC9C-201ENST00000294161 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
TTC9C-201ENST00000294161 TRIM44Q96DX7 344 aaPredicted RBP17.55■□□□□ 0.4
TTC9C-201ENST00000294161 CCNL1Q9UK58 526 aaPredicted RBP17.55■□□□□ 0.4
TTC9C-201ENST00000294161 LETM1O95202 739 aaPredicted RBP17.54■□□□□ 0.4
TTC9C-201ENST00000294161 USP48Q86UV5 1035 aa17.54■□□□□ 0.4
TTC9C-201ENST00000294161 PROM2Q8N271 834 aa17.54■□□□□ 0.4
TTC9C-201ENST00000294161 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
TTC9C-201ENST00000294161 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
TTC9C-201ENST00000294161 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
TTC9C-201ENST00000294161 PDE8AO60658 829 aa17.54■□□□□ 0.4
TTC9C-201ENST00000294161 CTSWP56202 376 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms