RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 ATP6V0A2Q9Y487 856 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
SLX4-201ENST00000294008 RRAGBQ5VZM2 374 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
SLX4-201ENST00000294008 SELENOOQ9BVL4 669 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 MFSD6Q6ZSS7 791 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 CCDC77Q9BR77 488 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 SLC8A3P57103 927 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 CDR2Q01850 454 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 FAM47CQ5HY64 1035 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 GOLIM4O00461 696 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 ACBD5Q5T8D3 534 aaPredicted RBP14.1□□□□□ -0.15
SLX4-201ENST00000294008 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 OPA1O60313 960 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 MAN1A1P33908 653 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
SLX4-201ENST00000294008 FAM204AQ9H8W3 233 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 TLDC2A0PJX2 215 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 GNAT3A8MTJ3 354 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 HGSO14964 777 aaPredicted RBP14.1□□□□□ -0.15
SLX4-201ENST00000294008 MSANTD4Q8NCY6 345 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 FAM114A2Q9NRY5 505 aa14.1□□□□□ -0.15
SLX4-201ENST00000294008 CNGA1P29973 690 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 C6orf50Q9HD87 102 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
SLX4-201ENST00000294008 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
SLX4-201ENST00000294008 NCAPGQ9BPX3 1015 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 BIRC3Q13489 604 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 DNAJC21Q5F1R6 531 aaKnown RBP14.09□□□□□ -0.15
SLX4-201ENST00000294008 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 INF2Q27J81 1249 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 ATP5J2-PTCD1G3V325 749 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 CCT6AP40227 531 aaKnown RBP14.09□□□□□ -0.15
SLX4-201ENST00000294008 RNF217Q8TC41 542 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 PKNOX2Q96KN3 472 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 CRNKL1Q9BZJ0 848 aaKnown RBP14.09□□□□□ -0.15
SLX4-201ENST00000294008 LIMCH1Q9UPQ0 1083 aa14.09□□□□□ -0.15
SLX4-201ENST00000294008 SETDB1Q15047 1291 aa14.08□□□□□ -0.15
SLX4-201ENST00000294008 SPDYE3A6NKU9 549 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 NBPF8Q3BBV2 869 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 NBPF14Q5TI25 921 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 CAPZA3Q96KX2 299 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 ZYXQ15942 572 aaKnown RBP14.08□□□□□ -0.16
SLX4-201ENST00000294008 BAG1Q99933 345 aaPredicted RBP14.08□□□□□ -0.16
SLX4-201ENST00000294008 N4BP3O15049 544 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 NUF2Q9BZD4 464 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 TFIP11Q9UBB9 837 aaKnown RBP14.08□□□□□ -0.16
SLX4-201ENST00000294008 PRR16Q569H4 304 aa14.08□□□□□ -0.16
SLX4-201ENST00000294008 GOLGA6CA6NDK9 693 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 GOLGA6BA6NDN3 693 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 GOLGA6DP0CG33 693 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 NAPAP54920 295 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 FBXW4P57775 412 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 PDCD7Q8N8D1 485 aaKnown RBP14.07□□□□□ -0.16
SLX4-201ENST00000294008 PLIN2Q99541 437 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 GOLGA6AQ9NYA3 693 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLX4-201ENST00000294008 PLCB4Q15147 1175 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 MAEAQ7L5Y9 396 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 CEP57Q86XR8 500 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 MCM7P33993 719 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 GSTO1P78417 241 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 DCAF17Q5H9S7 520 aaPredicted RBP14.07□□□□□ -0.16
SLX4-201ENST00000294008 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 NSMCE1Q8WV22 266 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 USP16Q9Y5T5 823 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 PARP3Q9Y6F1 533 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
SLX4-201ENST00000294008 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
SLX4-201ENST00000294008 IVNS1ABPQ9Y6Y0 642 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
SLX4-201ENST00000294008 CHMP2AO43633 222 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 CHD1LQ86WJ1 897 aa14.07□□□□□ -0.16
SLX4-201ENST00000294008 SH2D4BQ5SQS7 431 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CEP85LQ5SZL2 805 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
SLX4-201ENST00000294008 NOP56O00567 594 aaKnown RBP14.06□□□□□ -0.16
SLX4-201ENST00000294008 RAB3GAP1Q15042 981 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 ABCF3Q9NUQ8 709 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CASC4Q6P4E1 433 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 DDX27Q96GQ7 796 aaKnown RBP14.06□□□□□ -0.16
SLX4-201ENST00000294008 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
SLX4-201ENST00000294008 SETDB2Q96T68 719 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.06□□□□□ -0.16
SLX4-201ENST00000294008 ASIC1P78348 528 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
SLX4-201ENST00000294008 IFT81Q8WYA0 676 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 LRRC27Q9C0I9 530 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 PICK1Q9NRD5 415 aa14.06□□□□□ -0.16
SLX4-201ENST00000294008 CIB2O75838 187 aa14.05□□□□□ -0.16
SLX4-201ENST00000294008 OATP04181 439 aa14.05□□□□□ -0.16
SLX4-201ENST00000294008 RAPGEF1Q13905 1077 aa14.05□□□□□ -0.16
SLX4-201ENST00000294008 CCDC169A6NNP5 214 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms