RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 RIPOR2Q9Y4F9 1068 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 TTC41PQ6P2S7 1318 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 ANKRD45Q5TZF3 282 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 STAP2Q9UGK3 403 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 GORABQ5T7V8 394 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 C3orf67Q6ZVT6 689 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 RPGRQ92834 1020 aaKnown RBP10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 SGIP1Q9BQI5 828 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
PTPDC1-201ENST00000288976 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 ANKRD2Q9GZV1 360 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 SASH1O94885 1247 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 VGLL2Q8N8G2 317 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 MASTLQ96GX5 879 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 PA2G4Q9UQ80 394 aaKnown RBP10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 ALDH1B1P30837 517 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 CACNA1SQ13698 1873 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 ARFGEF1Q9Y6D6 1849 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 BBOX1O75936 387 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 GPATCH3Q96I76 525 aa10.33□□□□□ -0.76
PTPDC1-201ENST00000288976 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 SRGNP10124 158 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 TGFB2P61812 414 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 CLASRPQ8N2M8 674 aaKnown RBP10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 MAST2Q6P0Q8 1798 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 PDE4AP27815 886 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 ZNF512BQ96KM6 892 aaPredicted RBP10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 CNNM1Q9NRU3 951 aa10.32□□□□□ -0.76
PTPDC1-201ENST00000288976 R3HDM1Q15032 1099 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 LDHAL6AQ6ZMR3 332 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 MPHOSPH8Q99549 860 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 RPS8P62241 208 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 TFCP2Q12800 502 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 CD2APQ9Y5K6 639 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 TAF1P21675 1872 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 DOCK2Q92608 1830 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 PUM3Q15397 648 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 C15orf52Q6ZUT6 534 aaKnown RBP10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 SEC31BQ9NQW1 1179 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 AK9Q5TCS8 1911 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 RFX7Q2KHR2 1363 aa10.31□□□□□ -0.76
PTPDC1-201ENST00000288976 FGFR2P21802 821 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 LRRC24Q50LG9 513 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 CEP126Q9P2H0 1117 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 H0YIN7 160 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 MX1P20591 662 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 ZNF594Q96JF6 807 aaPredicted RBP10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 SNED1Q8TER0 1413 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 PDE8BO95263 885 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 SP8Q8IXZ3 490 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 SIL1Q9H173 461 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 NCLP19338 710 aaKnown RBP10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 PTGER2P43116 358 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 LNPKQ9C0E8 428 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 MYH13Q9UKX3 1938 aa10.3□□□□□ -0.76
PTPDC1-201ENST00000288976 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 IFIT2P09913 472 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 UBE4AQ14139 1066 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 METTL24Q5JXM2 366 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 LPIN2Q92539 896 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 PUS3Q9BZE2 481 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 XDHP47989 1333 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 PDS5AQ29RF7 1337 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 ERC2O15083 957 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 RAD21O60216 631 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 CELF1Q92879 486 aaKnown RBP10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 CHRNDQ07001 517 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 AACSQ86V21 672 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 MINPP1Q9UNW1 487 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 LEMD3Q9Y2U8 911 aa10.29□□□□□ -0.76
PTPDC1-201ENST00000288976 EIF5BO60841 1220 aaKnown RBP10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 IGSF3O75054 1194 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 SLC5A1P13866 664 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 PDE1AP54750 535 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 SMARCA5O60264 1052 aaPredicted RBP10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 SOGA3Q5TF21 947 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 IRS2Q9Y4H2 1338 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 ATP2B3Q16720 1220 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 EAF2Q96CJ1 260 aaPredicted RBP10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 ECHDC1Q9NTX5 307 aa10.28□□□□□ -0.76
PTPDC1-201ENST00000288976 MED23Q9ULK4 1368 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms