RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 LTBP1Q14766 1721 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 RIMBP2O15034 1052 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 UFL1O94874 794 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 TBC1D16Q8TBP0 767 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 PODXL2Q9NZ53 605 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 GGA1Q9UJY5 639 aa31.67■■■□□ 2.66
PDF-201ENST00000288022 CCDC57Q2TAC2 916 aa31.66■■■□□ 2.66
PDF-201ENST00000288022 XDHP47989 1333 aa31.66■■■□□ 2.66
PDF-201ENST00000288022 GPR101Q96P66 508 aaPredicted RBP31.65■■■□□ 2.66
PDF-201ENST00000288022 USP44Q9H0E7 712 aa31.65■■■□□ 2.66
PDF-201ENST00000288022 ZNRF3Q9ULT6 936 aa31.65■■■□□ 2.66
PDF-201ENST00000288022 MINPP1Q9UNW1 487 aa31.65■■■□□ 2.66
PDF-201ENST00000288022 GJA3Q9Y6H8 435 aa31.65■■■□□ 2.66
PDF-201ENST00000288022 TOMM70O94826 608 aa31.64■■■□□ 2.66
PDF-201ENST00000288022 TAF7LQ5H9L4 462 aa31.64■■■□□ 2.66
PDF-201ENST00000288022 GPC2Q8N158 579 aa31.63■■■□□ 2.65
PDF-201ENST00000288022 KAZALD1Q96I82 304 aa31.63■■■□□ 2.65
PDF-201ENST00000288022 BICC1Q9H694 974 aaKnown RBP31.63■■■□□ 2.65
PDF-201ENST00000288022 ZC3H12CQ9C0D7 883 aaKnown RBP31.62■■■□□ 2.65
PDF-201ENST00000288022 POTECB2RU33 542 aa31.61■■■□□ 2.65
PDF-201ENST00000288022 ATP2B4P23634 1241 aa31.61■■■□□ 2.65
PDF-201ENST00000288022 ATF7IPQ6VMQ6 1270 aa31.61■■■□□ 2.65
PDF-201ENST00000288022 L3MBTL3Q96JM7 780 aaPredicted RBP31.61■■■□□ 2.65
PDF-201ENST00000288022 TRIM27P14373 513 aa31.6■■■□□ 2.65
PDF-201ENST00000288022 IQCA1LA6NCM1 817 aa31.59■■■□□ 2.65
PDF-201ENST00000288022 G3V3G9 751 aa31.59■■■□□ 2.65
PDF-201ENST00000288022 DCAF8Q5TAQ9 597 aa31.59■■■□□ 2.65
PDF-201ENST00000288022 ZKSCAN2Q63HK3 967 aa31.59■■■□□ 2.65
PDF-201ENST00000288022 ZNF594Q96JF6 807 aaPredicted RBP31.59■■■□□ 2.65
PDF-201ENST00000288022 DBNDD1Q9H9R9 158 aa31.59■■■□□ 2.65
PDF-201ENST00000288022 UBTFL1P0CB47 393 aaPredicted RBP31.58■■■□□ 2.65
PDF-201ENST00000288022 CXCL9Q07325 125 aa31.58■■■□□ 2.65
PDF-201ENST00000288022 DOK7Q18PE1 504 aa31.58■■■□□ 2.65
PDF-201ENST00000288022 CLUAP1Q96AJ1 413 aa31.58■■■□□ 2.65
PDF-201ENST00000288022 ANKRD2Q9GZV1 360 aa31.58■■■□□ 2.65
PDF-201ENST00000288022 RAD17O75943 681 aa31.57■■■□□ 2.64
PDF-201ENST00000288022 ANKRD44Q8N8A2 993 aa31.57■■■□□ 2.64
PDF-201ENST00000288022 TNNQ9UQP3 1299 aa31.57■■■□□ 2.64
PDF-201ENST00000288022 ECE2O60344 883 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 CHRNDQ07001 517 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 RABL6Q3YEC7 729 aaPredicted RBP31.56■■■□□ 2.64
PDF-201ENST00000288022 INTS3Q68E01 1043 aaKnown RBP31.56■■■□□ 2.64
PDF-201ENST00000288022 CIAPIN1Q6FI81 312 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 LDHAL6AQ6ZMR3 332 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 RBM46Q8TBY0 533 aaKnown RBP31.56■■■□□ 2.64
PDF-201ENST00000288022 HACL1Q9UJ83 578 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 SCN4AP35499 1836 aa31.56■■■□□ 2.64
PDF-201ENST00000288022 YDJCA8MPS7 323 aa31.55■■■□□ 2.64
PDF-201ENST00000288022 CNNM1Q9NRU3 951 aa31.55■■■□□ 2.64
PDF-201ENST00000288022 LMOD1P29536 600 aaPredicted RBP31.54■■■□□ 2.64
PDF-201ENST00000288022 KCNJ4P48050 445 aa31.54■■■□□ 2.64
PDF-201ENST00000288022 TNIP1Q15025 636 aa31.54■■■□□ 2.64
PDF-201ENST00000288022 LEMD3Q9Y2U8 911 aa31.54■■■□□ 2.64
PDF-201ENST00000288022 WTIPA6NIX2 430 aaPredicted RBP31.53■■■□□ 2.64
PDF-201ENST00000288022 HDAC5Q9UQL6 1122 aa31.53■■■□□ 2.64
PDF-201ENST00000288022 HELBQ8NG08 1087 aaPredicted RBP31.52■■■□□ 2.64
PDF-201ENST00000288022 MEIS3Q99687 375 aa31.52■■■□□ 2.64
PDF-201ENST00000288022 TAF1DQ9H5J8 278 aaPredicted RBP31.52■■■□□ 2.64
PDF-201ENST00000288022 ZNF804BA4D1E1 1349 aa31.51■■■□□ 2.64
PDF-201ENST00000288022 MED23Q9ULK4 1368 aa31.51■■■□□ 2.63
PDF-201ENST00000288022 PLIN1O60240 522 aa31.5■■■□□ 2.63
PDF-201ENST00000288022 TAF5LO75529 589 aa31.5■■■□□ 2.63
PDF-201ENST00000288022 EPHX2P34913 555 aa31.5■■■□□ 2.63
PDF-201ENST00000288022 SMC1BQ8NDV3 1235 aa31.5■■■□□ 2.63
PDF-201ENST00000288022 SCNN1DP51172 638 aa31.49■■■□□ 2.63
PDF-201ENST00000288022 EAPPQ56P03 285 aaPredicted RBP31.49■■■□□ 2.63
PDF-201ENST00000288022 FTSJ3Q8IY81 847 aaKnown RBP31.49■■■□□ 2.63
PDF-201ENST00000288022 LRRFIP2Q9Y608 721 aaKnown RBP31.49■■■□□ 2.63
PDF-201ENST00000288022 GNAI3P08754 354 aa31.48■■■□□ 2.63
PDF-201ENST00000288022 GMPSP49915 693 aaPredicted RBP31.48■■■□□ 2.63
PDF-201ENST00000288022 FSTL1Q12841 308 aa31.48■■■□□ 2.63
PDF-201ENST00000288022 A0A1B0GUL6 1792 aa31.48■■■□□ 2.63
PDF-201ENST00000288022 TMEM57Q8N5G2 664 aa31.47■■■□□ 2.63
PDF-201ENST00000288022 PUS3Q9BZE2 481 aaKnown RBP31.47■■■□□ 2.63
PDF-201ENST00000288022 KCNQ5Q9NR82 932 aa31.47■■■□□ 2.63
PDF-201ENST00000288022 PSMD14O00487 310 aa31.46■■■□□ 2.63
PDF-201ENST00000288022 EPS15P42566 896 aa31.46■■■□□ 2.63
PDF-201ENST00000288022 POTEIP0CG38 1075 aa31.45■■■□□ 2.63
PDF-201ENST00000288022 POTEJP0CG39 1038 aa31.45■■■□□ 2.63
PDF-201ENST00000288022 PNMA8AQ86V59 439 aaPredicted RBP31.45■■■□□ 2.63
PDF-201ENST00000288022 DZIP1LQ8IYY4 767 aaKnown RBP31.45■■■□□ 2.63
PDF-201ENST00000288022 KLHDC4Q8TBB5 520 aa31.45■■■□□ 2.63
PDF-201ENST00000288022 YTHDC1Q96MU7 727 aaKnown RBP31.45■■■□□ 2.63
PDF-201ENST00000288022 GPRC5DQ9NZD1 345 aa31.45■■■□□ 2.63
PDF-201ENST00000288022 SNAP23O00161 211 aa31.44■■■□□ 2.62
PDF-201ENST00000288022 KLRK1P26718 216 aa31.44■■■□□ 2.62
PDF-201ENST00000288022 TXNRD3Q86VQ6 643 aa31.44■■■□□ 2.62
PDF-201ENST00000288022 CLEC11AQ9Y240 323 aa31.44■■■□□ 2.62
PDF-201ENST00000288022 RCAN3Q9UKA8 241 aa31.43■■■□□ 2.62
PDF-201ENST00000288022 ZBTB12Q9Y330 459 aaPredicted RBP31.43■■■□□ 2.62
PDF-201ENST00000288022 LRRC24Q50LG9 513 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 CHADLQ6NUI6 762 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 PODNQ7Z5L7 613 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 LDHDQ86WU2 507 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 COA1Q9GZY4 146 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 RIPOR2Q9Y4F9 1068 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 MROH5Q6ZUA9 1318 aa31.42■■■□□ 2.62
PDF-201ENST00000288022 SCN9AQ15858 1988 aa31.41■■■□□ 2.62
PDF-201ENST00000288022 HSPA6P17066 643 aa31.41■■■□□ 2.62
PDF-201ENST00000288022 METTL24Q5JXM2 366 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms