RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PDZRN3Q9UPQ7 1066 aa26.99■■□□□ 1.91
PDLIM3-203ENST00000284771 IL15P40933 162 aaPredicted RBP26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 OS9Q13438 667 aaPredicted RBP26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 DLEC1Q9Y238 1755 aa26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 ALDH1B1P30837 517 aa26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 NUCB1Q02818 461 aa26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 KLHL34Q8N239 644 aa26.98■■□□□ 1.91
PDLIM3-203ENST00000284771 BBOX1O75936 387 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 TFCP2Q12800 502 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 SKAP1Q86WV1 359 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 LRRCC1Q9C099 1032 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 IL1RAPL2Q9NP60 686 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 MINPP1Q9UNW1 487 aa26.97■■□□□ 1.91
PDLIM3-203ENST00000284771 VGLL2Q8N8G2 317 aa26.96■■□□□ 1.91
PDLIM3-203ENST00000284771 KIF1BPQ96EK5 621 aa26.96■■□□□ 1.91
PDLIM3-203ENST00000284771 CACNA1SQ13698 1873 aa26.96■■□□□ 1.91
PDLIM3-203ENST00000284771 SLX4Q8IY92 1834 aa26.96■■□□□ 1.91
PDLIM3-203ENST00000284771 HELBQ8NG08 1087 aaPredicted RBP26.95■■□□□ 1.91
PDLIM3-203ENST00000284771 CHRNDQ07001 517 aa26.95■■□□□ 1.9
PDLIM3-203ENST00000284771 NLGN2Q8NFZ4 835 aa26.95■■□□□ 1.9
PDLIM3-203ENST00000284771 WTIPA6NIX2 430 aaPredicted RBP26.94■■□□□ 1.9
PDLIM3-203ENST00000284771 CHD1LQ86WJ1 897 aa26.94■■□□□ 1.9
PDLIM3-203ENST00000284771 ERC1Q8IUD2 1116 aa26.94■■□□□ 1.9
PDLIM3-203ENST00000284771 LNPKQ9C0E8 428 aa26.94■■□□□ 1.9
PDLIM3-203ENST00000284771 BCL11AQ9H165 835 aa26.94■■□□□ 1.9
PDLIM3-203ENST00000284771 TAF5LO75529 589 aa26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 PRPF40BQ6NWY9 871 aaKnown RBP26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 OLFM4Q6UX06 510 aa26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 C16orf71Q8IYS4 520 aaPredicted RBP26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 CNKSR1Q969H4 720 aa26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 FHDC1Q9C0D6 1143 aaPredicted RBP26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 MROH5Q6ZUA9 1318 aa26.93■■□□□ 1.9
PDLIM3-203ENST00000284771 SNAP23O00161 211 aa26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 PPEF1O14829 653 aaPredicted RBP26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 METTL24Q5JXM2 366 aa26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 CEP126Q9P2H0 1117 aa26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 PDE8BO95263 885 aa26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 EAF2Q96CJ1 260 aaPredicted RBP26.92■■□□□ 1.9
PDLIM3-203ENST00000284771 A0A1B0GUL6 1792 aa26.91■■□□□ 1.9
PDLIM3-203ENST00000284771 BRCA1P38398 1863 aaKnown RBP26.91■■□□□ 1.9
PDLIM3-203ENST00000284771 C7orf43Q8WVR3 580 aa26.91■■□□□ 1.9
PDLIM3-203ENST00000284771 ATP6V0A2Q9Y487 856 aa26.91■■□□□ 1.9
PDLIM3-203ENST00000284771 SP8Q8IXZ3 490 aa26.9■■□□□ 1.9
PDLIM3-203ENST00000284771 TTLL6Q8N841 843 aa26.9■■□□□ 1.9
PDLIM3-203ENST00000284771 WWC3Q9ULE0 1092 aa26.9■■□□□ 1.9
PDLIM3-203ENST00000284771 PDE4AP27815 886 aa26.89■■□□□ 1.9
PDLIM3-203ENST00000284771 OTUD7AQ8TE49 926 aaPredicted RBP26.89■■□□□ 1.9
PDLIM3-203ENST00000284771 PIM2Q9P1W9 311 aa26.89■■□□□ 1.9
PDLIM3-203ENST00000284771 LRRC37AA6NMS7 1700 aa26.89■■□□□ 1.89
PDLIM3-203ENST00000284771 TIMM10P62072 90 aa26.89■■□□□ 1.89
PDLIM3-203ENST00000284771 TNNI3KQ59H18 835 aa26.89■■□□□ 1.89
PDLIM3-203ENST00000284771 FPGT-TNNI3KV9GXZ4 949 aa26.89■■□□□ 1.89
PDLIM3-203ENST00000284771 TMC4Q7Z404 712 aa26.88■■□□□ 1.89
PDLIM3-203ENST00000284771 SYT17Q9BSW7 474 aa26.88■■□□□ 1.89
PDLIM3-203ENST00000284771 UTRNP46939 3433 aa26.87■■□□□ 1.89
PDLIM3-203ENST00000284771 GPSM2P81274 684 aa26.87■■□□□ 1.89
PDLIM3-203ENST00000284771 CLASRPQ8N2M8 674 aaKnown RBP26.87■■□□□ 1.89
PDLIM3-203ENST00000284771 GPR108Q9NPR9 543 aa26.87■■□□□ 1.89
PDLIM3-203ENST00000284771 FGFR2P21802 821 aa26.86■■□□□ 1.89
PDLIM3-203ENST00000284771 ZNF219Q9P2Y4 722 aaPredicted RBP26.86■■□□□ 1.89
PDLIM3-203ENST00000284771 CCDC8Q9H0W5 538 aaPredicted RBP26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 TLR7Q9NYK1 1049 aaKnown RBP26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 NSFL1CQ9UNZ2 370 aaKnown RBP26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 A0A1B0GUL7 405 aa26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 AACSQ86V21 672 aa26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 ANKRD2Q9GZV1 360 aa26.85■■□□□ 1.89
PDLIM3-203ENST00000284771 C21orf2O43822 256 aa26.84■■□□□ 1.89
PDLIM3-203ENST00000284771 ANKIB1Q9P2G1 1089 aa26.84■■□□□ 1.89
PDLIM3-203ENST00000284771 SALL3Q9BXA9 1300 aa26.84■■□□□ 1.89
PDLIM3-203ENST00000284771 LTBP1Q14766 1721 aa26.84■■□□□ 1.89
PDLIM3-203ENST00000284771 ZNF609O15014 1411 aa26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 PUM3Q15397 648 aaKnown RBP26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 ATP2B3Q16720 1220 aa26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 PODXL2Q9NZ53 605 aa26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 ZBTB47Q9UFB7 747 aaPredicted RBP26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 DBNLQ9UJU6 430 aaKnown RBP26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 SNED1Q8TER0 1413 aa26.83■■□□□ 1.89
PDLIM3-203ENST00000284771 NEUROD6Q96NK8 337 aa26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 AKAP2Q9Y2D5 859 aa26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 XDHP47989 1333 aa26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 DALRD3Q5D0E6 543 aaKnown RBP26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 DBNDD2Q9BQY9 259 aa26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 POLLQ9UGP5 575 aa26.82■■□□□ 1.88
PDLIM3-203ENST00000284771 ADORA1P30542 326 aa26.81■■□□□ 1.88
PDLIM3-203ENST00000284771 UBE4AQ14139 1066 aa26.81■■□□□ 1.88
PDLIM3-203ENST00000284771 LPIN2Q92539 896 aa26.81■■□□□ 1.88
PDLIM3-203ENST00000284771 KLRK1P26718 216 aa26.8■■□□□ 1.88
PDLIM3-203ENST00000284771 PLEKHM2Q8IWE5 1019 aa26.8■■□□□ 1.88
PDLIM3-203ENST00000284771 ZNF804BA4D1E1 1349 aa26.8■■□□□ 1.88
PDLIM3-203ENST00000284771 IFIT2P09913 472 aaKnown RBP26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 MPNDQ8N594 471 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 TBC1D16Q8TBP0 767 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 XAGE2Q96GT9 111 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 IRS2Q9Y4H2 1338 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 DUOX1Q9NRD9 1551 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 TSHZ3Q63HK5 1081 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 TXNRD3Q86VQ6 643 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 GPR101Q96P66 508 aaPredicted RBP26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 BCS1LQ9Y276 419 aa26.79■■□□□ 1.88
PDLIM3-203ENST00000284771 LEMD3Q9Y2U8 911 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms