RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 CARD10Q9BWT7 1032 aa13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
SIRPB1-202ENST00000279477 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
SIRPB1-202ENST00000279477 EYA2O00167 538 aa13.5□□□□□ -0.25
SIRPB1-202ENST00000279477 TPM3P06753 285 aa13.5□□□□□ -0.25
SIRPB1-202ENST00000279477 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
SIRPB1-202ENST00000279477 DDX19AQ9NUU7 478 aaKnown RBP13.5□□□□□ -0.25
SIRPB1-202ENST00000279477 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 KIAA2012Q0VF49 1180 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 PIP4K2AP48426 406 aaPredicted RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 ATG9AQ7Z3C6 839 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 NUP62CLQ9H1M0 184 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 AKAP2Q9Y2D5 859 aa13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
SIRPB1-202ENST00000279477 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 FGD1P98174 961 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 ZMYM1Q5SVZ6 1142 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 DDX46Q7L014 1031 aaKnown RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 ZFYP08048 801 aaPredicted RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 CYP21A2P08686 494 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 Q6ZUG5 572 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 CFAP45Q9UL16 551 aa13.48□□□□□ -0.25
SIRPB1-202ENST00000279477 H3BQV1 296 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 KDM4AO75164 1064 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 IFFO2Q5TF58 517 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 TTC6Q86TZ1 520 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 MYH7P12883 1935 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 ANKRD36CQ5JPF3 1778 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 GOLGA6L6A8MZA4 724 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 GOLIM4O00461 696 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 PFKFB2O60825 505 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 CAVIN2O95810 425 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 TTLL7Q6ZT98 887 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 USP25Q9UHP3 1055 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 NHSL1Q5SYE7 1610 aa13.47□□□□□ -0.25
SIRPB1-202ENST00000279477 LRP6O75581 1613 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 CCDC158Q5M9N0 1113 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 SMARCC2Q8TAQ2 1214 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 ISCA1Q9BUE6 129 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 PLA2G12BQ9BX93 195 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
SIRPB1-202ENST00000279477 A0A1B0GUL7 405 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 ADCY5O95622 1261 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 STK3Q13188 491 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 FBXL16Q8N461 479 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 FAM200AQ8TCP9 573 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 CCDC129Q6ZRS4 1044 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 TNMDQ9H2S6 317 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
SIRPB1-202ENST00000279477 A1BGP04217 495 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 MYH3P11055 1940 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 RESTQ13127 1097 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 BRF1Q92994 677 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 PLCH1Q4KWH8 1693 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 RBM43Q6ZSC3 357 aaKnown RBP13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
SIRPB1-202ENST00000279477 MAST3O60307 1309 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 SEC62Q99442 399 aaKnown RBP13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 HSPD1P10809 573 aaKnown RBP13.43□□□□□ -0.26
SIRPB1-202ENST00000279477 EXOSC10Q01780 885 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms