RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SLX4Q8IY92 1834 aa21.33■■□□□ 1
SKP2-201ENST00000274254 IL15P40933 162 aaPredicted RBP21.32■■□□□ 1
SKP2-201ENST00000274254 G3BP1Q13283 466 aaKnown RBP eCLIP21.32■■□□□ 1
SKP2-201ENST00000274254 TTLL6Q8N841 843 aa21.32■■□□□ 1
SKP2-201ENST00000274254 SYT17Q9BSW7 474 aa21.32■■□□□ 1
SKP2-201ENST00000274254 PIM2Q9P1W9 311 aa21.32■■□□□ 1
SKP2-201ENST00000274254 CACNA1SQ13698 1873 aa21.31■■□□□ 1
SKP2-201ENST00000274254 PPEF1O14829 653 aaPredicted RBP21.31■■□□□ 1
SKP2-201ENST00000274254 LRRC37AA6NMS7 1700 aa21.31■■□□□ 1
SKP2-201ENST00000274254 RAB11FIP3O75154 756 aa21.3■■□□□ 1
SKP2-201ENST00000274254 SASH1O94885 1247 aa21.3■■□□□ 1
SKP2-201ENST00000274254 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
SKP2-201ENST00000274254 ATP6V0A2Q9Y487 856 aa21.3■■□□□ 1
SKP2-201ENST00000274254 MROH5Q6ZUA9 1318 aa21.3■■□□□ 1
SKP2-201ENST00000274254 ERC1Q8IUD2 1116 aa21.29■■□□□ 1
SKP2-201ENST00000274254 C7orf43Q8WVR3 580 aa21.29■■□□□ 1
SKP2-201ENST00000274254 OS9Q13438 667 aaPredicted RBP21.29■■□□□ 1
SKP2-201ENST00000274254 CENPQQ7L2Z9 268 aaPredicted RBP21.29■■□□□ 1
SKP2-201ENST00000274254 SLC51AQ86UW1 340 aa21.29■■□□□ 1
SKP2-201ENST00000274254 SP8Q8IXZ3 490 aa21.29■■□□□ 1
SKP2-201ENST00000274254 VGLL2Q8N8G2 317 aa21.29■■□□□ 1
SKP2-201ENST00000274254 CHRNDQ07001 517 aa21.28■■□□□ 1
SKP2-201ENST00000274254 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
SKP2-201ENST00000274254 A0A1B0GUL6 1792 aa21.28■■□□□ 1
SKP2-201ENST00000274254 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
SKP2-201ENST00000274254 METTL24Q5JXM2 366 aa21.27■■□□□ 1
SKP2-201ENST00000274254 RHPN1Q8TCX5 695 aa21.27■■□□□ 1
SKP2-201ENST00000274254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.27■■□□□ 1
SKP2-201ENST00000274254 TFCP2Q12800 502 aa21.26■□□□□ 0.99
SKP2-201ENST00000274254 LRRCC1Q9C099 1032 aa21.26■□□□□ 0.99
SKP2-201ENST00000274254 CEP126Q9P2H0 1117 aa21.26■□□□□ 0.99
SKP2-201ENST00000274254 APBB1O00213 710 aa21.25■□□□□ 0.99
SKP2-201ENST00000274254 PDE8BO95263 885 aa21.25■□□□□ 0.99
SKP2-201ENST00000274254 ANKRD2Q9GZV1 360 aa21.25■□□□□ 0.99
SKP2-201ENST00000274254 SNED1Q8TER0 1413 aa21.25■□□□□ 0.99
SKP2-201ENST00000274254 LTBP1Q14766 1721 aa21.25■□□□□ 0.99
SKP2-201ENST00000274254 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
SKP2-201ENST00000274254 OLFM4Q6UX06 510 aa21.24■□□□□ 0.99
SKP2-201ENST00000274254 HELBQ8NG08 1087 aaPredicted RBP21.24■□□□□ 0.99
SKP2-201ENST00000274254 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
SKP2-201ENST00000274254 NUCB1Q02818 461 aa21.24■□□□□ 0.99
SKP2-201ENST00000274254 CC2D2BQ6DHV5 1058 aa21.24■□□□□ 0.99
SKP2-201ENST00000274254 GPR108Q9NPR9 543 aa21.24■□□□□ 0.99
SKP2-201ENST00000274254 XDHP47989 1333 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 C21orf2O43822 256 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 TAF5LO75529 589 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 GPSM2P81274 684 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 ANKRD45Q5TZF3 282 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 WWC3Q9ULE0 1092 aa21.23■□□□□ 0.99
SKP2-201ENST00000274254 ARFGEF1Q9Y6D6 1849 aa21.22■□□□□ 0.99
SKP2-201ENST00000274254 SMARCA5O60264 1052 aaPredicted RBP21.22■□□□□ 0.99
SKP2-201ENST00000274254 FGFR2P21802 821 aa21.22■□□□□ 0.99
SKP2-201ENST00000274254 TMX4Q9H1E5 349 aaPredicted RBP21.22■□□□□ 0.99
SKP2-201ENST00000274254 ANKIB1Q9P2G1 1089 aa21.22■□□□□ 0.99
SKP2-201ENST00000274254 NSFL1CQ9UNZ2 370 aaKnown RBP21.22■□□□□ 0.99
SKP2-201ENST00000274254 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
SKP2-201ENST00000274254 PUM3Q15397 648 aaKnown RBP21.21■□□□□ 0.99
SKP2-201ENST00000274254 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
SKP2-201ENST00000274254 ZNF219Q9P2Y4 722 aaPredicted RBP21.21■□□□□ 0.99
SKP2-201ENST00000274254 AKAP2Q9Y2D5 859 aa21.21■□□□□ 0.99
SKP2-201ENST00000274254 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
SKP2-201ENST00000274254 ZNF609O15014 1411 aa21.21■□□□□ 0.99
SKP2-201ENST00000274254 DUOX1Q9NRD9 1551 aa21.2■□□□□ 0.99
SKP2-201ENST00000274254 UBE4AQ14139 1066 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 GRIPAP1Q4V328 841 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 CCDC93Q567U6 631 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 SOGA3Q5TF21 947 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 CLASRPQ8N2M8 674 aaKnown RBP21.2■□□□□ 0.98
SKP2-201ENST00000274254 MPNDQ8N594 471 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 EAF2Q96CJ1 260 aaPredicted RBP21.2■□□□□ 0.98
SKP2-201ENST00000274254 LEMD3Q9Y2U8 911 aa21.2■□□□□ 0.98
SKP2-201ENST00000274254 WTIPA6NIX2 430 aaPredicted RBP21.19■□□□□ 0.98
SKP2-201ENST00000274254 SNAP23O00161 211 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 ATP2B3Q16720 1220 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 A0A1B0GUL7 405 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 TBC1D16Q8TBP0 767 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 LPIN2Q92539 896 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
SKP2-201ENST00000274254 LNPKQ9C0E8 428 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 POLLQ9UGP5 575 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 GGA1Q9UJY5 639 aa21.19■□□□□ 0.98
SKP2-201ENST00000274254 ZNF804BA4D1E1 1349 aa21.18■□□□□ 0.98
SKP2-201ENST00000274254 TIMM10P62072 90 aa21.18■□□□□ 0.98
SKP2-201ENST00000274254 DPP8Q6V1X1 898 aaPredicted RBP21.18■□□□□ 0.98
SKP2-201ENST00000274254 ZBTB47Q9UFB7 747 aaPredicted RBP21.18■□□□□ 0.98
SKP2-201ENST00000274254 UFL1O94874 794 aa21.17■□□□□ 0.98
SKP2-201ENST00000274254 AACSQ86V21 672 aa21.17■□□□□ 0.98
SKP2-201ENST00000274254 IRS2Q9Y4H2 1338 aa21.17■□□□□ 0.98
SKP2-201ENST00000274254 FER1L6Q2WGJ9 1857 aa21.17■□□□□ 0.98
SKP2-201ENST00000274254 KCNJ4P48050 445 aa21.16■□□□□ 0.98
SKP2-201ENST00000274254 ARAP2Q8WZ64 1704 aa21.16■□□□□ 0.98
SKP2-201ENST00000274254 IFIT1P09914 478 aaKnown RBP21.15■□□□□ 0.98
SKP2-201ENST00000274254 SLC5A1P13866 664 aa21.15■□□□□ 0.98
SKP2-201ENST00000274254 C15orf52Q6ZUT6 534 aaKnown RBP21.15■□□□□ 0.98
SKP2-201ENST00000274254 PSMD1Q99460 953 aa21.15■□□□□ 0.98
SKP2-201ENST00000274254 DBNLQ9UJU6 430 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms