RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 IFIT2P09913 472 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 CPA1P15085 419 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 ANAPC15P60006 121 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 FLIIQ13045 1269 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 CC2D1AQ6P1N0 951 aaPredicted RBP18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 EXOC4Q96A65 974 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 VPS37CA5D8V6 355 aaPredicted RBP18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 KCNQ3O43525 872 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 CDC25BP30305 580 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 NOM1Q5C9Z4 860 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 FERMT3Q86UX7 667 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 ELP1O95163 1332 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 SMC3Q9UQE7 1217 aa18.36■□□□□ 0.53
CTDSP1-201ENST00000273062 GNAI3P08754 354 aa18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 AK2P54819 239 aa18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 MPRIPQ6WCQ1 1025 aa18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 C11orf57Q6ZUT1 292 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 CCDC91Q7Z6B0 441 aa18.35■□□□□ 0.53
CTDSP1-201ENST00000273062 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 TADA3O75528 432 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 GJB2P29033 226 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 C1orf167Q5SNV9 1468 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 PXDNQ92626 1479 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 CHMLP26374 656 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 CCDC30Q5VVM6 783 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 RILPL2Q969X0 211 aa18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
CTDSP1-201ENST00000273062 CCDC189A1A4V9 331 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 NEMFO60524 1076 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 NR1I2O75469 434 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 SATB1Q01826 763 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 CARD6Q9BX69 1037 aa18.33■□□□□ 0.53
CTDSP1-201ENST00000273062 CEMIPQ8WUJ3 1361 aa18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 IQCB1Q15051 598 aa18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 PSD3Q9NYI0 1048 aa18.33■□□□□ 0.52
CTDSP1-201ENST00000273062 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 LEKR1Q6ZMV7 388 aa18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 SUGP1Q8IWZ8 645 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 MRFAP1L1Q96HT8 127 aa18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 FUT8Q9BYC5 575 aa18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 CORO7P57737 925 aa18.32■□□□□ 0.52
CTDSP1-201ENST00000273062 SWT1Q5T5J6 900 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 HDGFL1Q5TGJ6 251 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 PPM1EQ8WY54 764 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 TTC14Q96N46 770 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 C19orf44Q9H6X5 657 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 HSPA2P54652 639 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 EVCP57679 992 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 TTLL5Q6EMB2 1281 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 RBM43Q6ZSC3 357 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 VPS18Q9P253 973 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 SLIT3O75094 1523 aa18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 TRPM3Q9HCF6 1732 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-201ENST00000273062 KIF2AO00139 706 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 ANXA1P04083 346 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 MAP2K2P36507 400 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 TDO2P48775 406 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 MNS1Q8NEH6 495 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 TFIP11Q9UBB9 837 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 SARM1Q6SZW1 724 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 CLSTN2Q9H4D0 955 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 KCND1Q9NSA2 647 aa18.3■□□□□ 0.52
CTDSP1-201ENST00000273062 CDC37L1Q7L3B6 337 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 GOLGA6L19H0YKK7 550 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 N4BP1O75113 896 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 IVLP07476 585 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 KAT2BQ92831 832 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
CTDSP1-201ENST00000273062 ATP8B1O43520 1251 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 HSPA4P34932 840 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 NBPF11Q86T75 865 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 OSBPL3Q9H4L5 887 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 URI1O94763 535 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-201ENST00000273062 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms