RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 INF2Q27J81 1249 aa17.83■□□□□ 0.45
UBR3-201ENST00000272793 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.83■□□□□ 0.459e-7■■■□□ 15
UBR3-201ENST00000272793 CTAGE5O15320 804 aa17.83■□□□□ 0.45
UBR3-201ENST00000272793 MPHOSPH6Q99547 160 aaKnown RBP17.83■□□□□ 0.45
UBR3-201ENST00000272793 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.45
UBR3-201ENST00000272793 SCHIP1Q9P0W5 487 aaPredicted RBP17.83■□□□□ 0.45
UBR3-201ENST00000272793 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.45
UBR3-201ENST00000272793 TRIM68Q6AZZ1 485 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 CTAGE15A4D2H0 777 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 CTAGE8P0CG41 777 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 USP37Q86T82 979 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 CTAGE4Q8IX94 777 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 PANK2Q9BZ23 570 aa17.83■□□□□ 0.44
UBR3-201ENST00000272793 HPDP32754 393 aaPredicted RBP17.82■□□□□ 0.44
UBR3-201ENST00000272793 TAOK1Q7L7X3 1001 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 NCBP1Q09161 790 aaKnown RBP17.82■□□□□ 0.44
UBR3-201ENST00000272793 SUFUQ9UMX1 484 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 GRM1Q13255 1194 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 STX1AQ16623 288 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 MCM10Q7L590 875 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 HNRNPCL2B2RXH8 293 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 HNRNPCL1O60812 293 aaKnown RBP17.82■□□□□ 0.44
UBR3-201ENST00000272793 NUDCD3Q8IVD9 361 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
UBR3-201ENST00000272793 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
UBR3-201ENST00000272793 DNAJC8O75937 253 aaPredicted RBP17.81■□□□□ 0.44
UBR3-201ENST00000272793 NUTM1Q86Y26 1132 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 SSFA2P28290 1259 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 B4GALNT4Q76KP1 1039 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 NKIRAS1Q9NYS0 192 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 AKR1B10O60218 316 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 ATP5DP30049 168 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 CTCFLQ8NI51 663 aaPredicted RBP17.81■□□□□ 0.44
UBR3-201ENST00000272793 NEMFO60524 1076 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 SKAP1Q86WV1 359 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 SRGAP3O43295 1099 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 SPDL1Q96EA4 605 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 RPS6KA2Q15349 733 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 TRIM47Q96LD4 638 aa17.81■□□□□ 0.44
UBR3-201ENST00000272793 IQCA1Q86XH1 822 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 NAPBQ9H115 298 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 CABP4P57796 275 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 CCDC38Q502W7 563 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 TFIP11Q9UBB9 837 aaKnown RBP17.8■□□□□ 0.44
UBR3-201ENST00000272793 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
UBR3-201ENST00000272793 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 PPARDQ03181 441 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 UBASH3AP57075 661 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 RILPQ96NA2 401 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 CYLC1P35663 651 aaPredicted RBP17.8■□□□□ 0.44
UBR3-201ENST00000272793 HAUS8Q9BT25 410 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 SRCIN1Q9C0H9 1055 aa17.8■□□□□ 0.44
UBR3-201ENST00000272793 FAF1Q9UNN5 650 aaPredicted RBP17.79■□□□□ 0.44
UBR3-201ENST00000272793 IGHMBP2P38935 993 aaKnown RBP17.79■□□□□ 0.44
UBR3-201ENST00000272793 NBPF11Q86T75 865 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 CATIPQ7Z7H3 387 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 FSIP1Q8NA03 581 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 SERPINI2O75830 405 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBR3-201ENST00000272793 SKOR1P84550 965 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 FAM76AQ8TAV0 307 aa17.79■□□□□ 0.44
UBR3-201ENST00000272793 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
UBR3-201ENST00000272793 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 MTRF1LQ9UGC7 380 aaKnown RBP17.78■□□□□ 0.44
UBR3-201ENST00000272793 TBCAO75347 108 aaKnown RBP17.78■□□□□ 0.44
UBR3-201ENST00000272793 MUM1Q2TAK8 710 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 IL1RL1Q01638 556 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 GOLGA1Q92805 767 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
UBR3-201ENST00000272793 SF3A3Q12874 501 aaKnown RBP eCLIP17.78■□□□□ 0.44
UBR3-201ENST00000272793 EIF2AQ9BY44 585 aaKnown RBP17.78■□□□□ 0.44
UBR3-201ENST00000272793 MKL2Q9ULH7 1088 aa17.78■□□□□ 0.44
UBR3-201ENST00000272793 N4BP3O15049 544 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 FAM13AO94988 1023 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 NUCKS1Q9H1E3 243 aaKnown RBP17.77■□□□□ 0.44
UBR3-201ENST00000272793 SLC4A1P02730 911 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 ZFYVE1Q9HBF4 777 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 SMARCA5O60264 1052 aaPredicted RBP17.77■□□□□ 0.44
UBR3-201ENST00000272793 GCKP35557 465 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.44
UBR3-201ENST00000272793 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.43
UBR3-201ENST00000272793 DHX57Q6P158 1386 aaKnown RBP17.77■□□□□ 0.43
UBR3-201ENST00000272793 PEX19P40855 299 aa17.76■□□□□ 0.43
UBR3-201ENST00000272793 UBA7P41226 1012 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms