RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 PDCP20941 246 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 MYO3AQ8NEV4 1616 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 APBA3O96018 575 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 RBM6P78332 1123 aaKnown RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
CNGA3-201ENST00000272602 PIGBQ92521 554 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 JAG2Q9Y219 1238 aa12.65□□□□□ -0.38
CNGA3-201ENST00000272602 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.39
CNGA3-201ENST00000272602 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.39
CNGA3-201ENST00000272602 A0A087WZG4 1122 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 GPS2Q13227 327 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
CNGA3-201ENST00000272602 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 KINO60870 393 aaKnown RBP12.64□□□□□ -0.39
CNGA3-201ENST00000272602 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
CNGA3-201ENST00000272602 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 KRBA2Q6ZNG9 492 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 PPP1R42Q7Z4L9 355 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 DNAI1Q9UI46 699 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 CD163L1Q9NR16 1453 aa12.64□□□□□ -0.39
CNGA3-201ENST00000272602 GNPATO15228 680 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 PTH1RQ03431 593 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 SYCP1Q15431 976 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 SH2B1Q9NRF2 756 aaPredicted RBP12.63□□□□□ -0.39
CNGA3-201ENST00000272602 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 ZCCHC17Q9NP64 241 aaKnown RBP12.63□□□□□ -0.39
CNGA3-201ENST00000272602 RSPH14Q9UHP6 348 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 ZC3H13Q5T200 1668 aaKnown RBP12.63□□□□□ -0.39
CNGA3-201ENST00000272602 IGSF1Q8N6C5 1336 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 RHPN1Q8TCX5 695 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 TFCP2L1Q9NZI6 479 aa12.63□□□□□ -0.39
CNGA3-201ENST00000272602 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 MST1RQ04912 1400 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 BIN1O00499 593 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 STARD3NLO95772 234 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 SNRPA1P09661 255 aaKnown RBP12.62□□□□□ -0.39
CNGA3-201ENST00000272602 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
CNGA3-201ENST00000272602 CAPN2P17655 700 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 TPM4P67936 248 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
CNGA3-201ENST00000272602 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 LEO1Q8WVC0 666 aaPredicted RBP12.62□□□□□ -0.39
CNGA3-201ENST00000272602 LRRC7Q96NW7 1537 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 TRMT112Q9UI30 125 aaKnown RBP12.62□□□□□ -0.39
CNGA3-201ENST00000272602 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
CNGA3-201ENST00000272602 CHL1O00533 1208 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 SEC31AO94979 1220 aaKnown RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 ME1P48163 572 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 LMAN1P49257 510 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 CLCN6P51797 869 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 GUCY1B3Q02153 619 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 SF3A1Q15459 793 aaKnown RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 ARHGAP23Q9P227 1491 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 RAD51AP2Q09MP3 1159 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
CNGA3-201ENST00000272602 TTC14Q96N46 770 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 ZSWIM4Q9H7M6 989 aa12.61□□□□□ -0.39
CNGA3-201ENST00000272602 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 GYS2P54840 703 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 PLA2G4DQ86XP0 818 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 LSG1Q9H089 658 aaKnown RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 CCDC8Q9H0W5 538 aaPredicted RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 EPC1Q9H2F5 836 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 DBF4Q9UBU7 674 aaPredicted RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 NEMFO60524 1076 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 CEP57L1Q8IYX8 460 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 ZNF594Q96JF6 807 aaPredicted RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 LRRC2Q9BYS8 371 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 RBM8AQ9Y5S9 174 aaKnown RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 DEFB132Q7Z7B7 95 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
CNGA3-201ENST00000272602 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
CNGA3-201ENST00000272602 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms