RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RPS8P62241 208 aaKnown RBP30.61■■■□□ 2.49
SSBP4-201ENST00000270061 UBE3BQ7Z3V4 1068 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 VPS33BQ9H267 617 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 ZNF541Q9H0D2 1346 aa30.61■■■□□ 2.49
SSBP4-201ENST00000270061 SCN4AP35499 1836 aa30.6■■■□□ 2.49
SSBP4-201ENST00000270061 POTECB2RU33 542 aa30.6■■■□□ 2.49
SSBP4-201ENST00000270061 PPIP5K2O43314 1243 aa30.6■■■□□ 2.49
SSBP4-201ENST00000270061 CCDC85AQ96PX6 553 aaPredicted RBP30.6■■■□□ 2.49
SSBP4-201ENST00000270061 SEC31BQ9NQW1 1179 aa30.6■■■□□ 2.49
SSBP4-201ENST00000270061 H7C1W4 665 aa30.59■■■□□ 2.49
SSBP4-201ENST00000270061 CTSWP56202 376 aa30.59■■■□□ 2.49
SSBP4-201ENST00000270061 C1orf115Q9H7X2 142 aa30.59■■■□□ 2.49
SSBP4-201ENST00000270061 AOC3Q16853 763 aa30.58■■■□□ 2.49
SSBP4-201ENST00000270061 RPAP2Q8IXW5 612 aaPredicted RBP30.57■■■□□ 2.48
SSBP4-201ENST00000270061 NIM1KQ8IY84 436 aa30.57■■■□□ 2.48
SSBP4-201ENST00000270061 MEIS3Q99687 375 aa30.57■■■□□ 2.48
SSBP4-201ENST00000270061 RBM19Q9Y4C8 960 aaKnown RBP30.57■■■□□ 2.48
SSBP4-201ENST00000270061 HSPA6P17066 643 aa30.56■■■□□ 2.48
SSBP4-201ENST00000270061 EIF6P56537 245 aaKnown RBP30.56■■■□□ 2.48
SSBP4-201ENST00000270061 SIRT2Q8IXJ6 389 aa30.56■■■□□ 2.48
SSBP4-201ENST00000270061 NSFL1CQ9UNZ2 370 aaKnown RBP30.56■■■□□ 2.48
SSBP4-201ENST00000270061 DUOX1Q9NRD9 1551 aa30.56■■■□□ 2.48
SSBP4-201ENST00000270061 BEND3Q5T5X7 828 aa30.56■■■□□ 2.48
SSBP4-201ENST00000270061 L3MBTL3Q96JM7 780 aaPredicted RBP30.56■■■□□ 2.48
SSBP4-201ENST00000270061 TTLL11Q8NHH1 800 aa30.55■■■□□ 2.48
SSBP4-201ENST00000270061 GCC1Q96CN9 775 aa30.55■■■□□ 2.48
SSBP4-201ENST00000270061 IQCA1LA6NCM1 817 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 FSTL1Q12841 308 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 GPC2Q8N158 579 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 ANKRD44Q8N8A2 993 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 SPEF2Q9C093 1822 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 GNAI3P08754 354 aa30.54■■■□□ 2.48
SSBP4-201ENST00000270061 KIAA2012Q0VF49 1180 aa30.53■■■□□ 2.48
SSBP4-201ENST00000270061 LTBP1Q14766 1721 aa30.53■■■□□ 2.48
SSBP4-201ENST00000270061 ANKRD18AQ8IVF6 992 aa30.53■■■□□ 2.48
SSBP4-201ENST00000270061 SMC1BQ8NDV3 1235 aa30.53■■■□□ 2.48
SSBP4-201ENST00000270061 RGS3P49796 1198 aa30.52■■■□□ 2.48
SSBP4-201ENST00000270061 CASP7P55210 303 aa30.52■■■□□ 2.48
SSBP4-201ENST00000270061 CDC5LQ99459 802 aaKnown RBP30.52■■■□□ 2.48
SSBP4-201ENST00000270061 PLA2G12BQ9BX93 195 aa30.52■■■□□ 2.48
SSBP4-201ENST00000270061 GPSM2P81274 684 aa30.51■■■□□ 2.48
SSBP4-201ENST00000270061 GREM2Q9H772 168 aa30.51■■■□□ 2.48
SSBP4-201ENST00000270061 CEP85Q6P2H3 762 aa30.51■■■□□ 2.47
SSBP4-201ENST00000270061 SRCIN1Q9C0H9 1055 aa30.51■■■□□ 2.47
SSBP4-201ENST00000270061 GJA3Q9Y6H8 435 aa30.51■■■□□ 2.47
SSBP4-201ENST00000270061 RTL9Q8NET4 1388 aa30.51■■■□□ 2.47
SSBP4-201ENST00000270061 C6orf229H3BNL8 230 aa30.49■■■□□ 2.47
SSBP4-201ENST00000270061 ZNRF3Q9ULT6 936 aa30.49■■■□□ 2.47
SSBP4-201ENST00000270061 GNAI2P04899 355 aa30.49■■■□□ 2.47
SSBP4-201ENST00000270061 WASHC4Q2M389 1173 aa30.49■■■□□ 2.47
SSBP4-201ENST00000270061 PDE4AP27815 886 aa30.48■■■□□ 2.47
SSBP4-201ENST00000270061 NUCB1Q02818 461 aa30.48■■■□□ 2.47
SSBP4-201ENST00000270061 ANKIB1Q9P2G1 1089 aa30.48■■■□□ 2.47
SSBP4-201ENST00000270061 POLLQ9UGP5 575 aa30.48■■■□□ 2.47
SSBP4-201ENST00000270061 HACL1Q9UJ83 578 aa30.48■■■□□ 2.47
SSBP4-201ENST00000270061 ALDH1L1O75891 902 aa30.47■■■□□ 2.47
SSBP4-201ENST00000270061 BACH2Q9BYV9 841 aa30.47■■■□□ 2.47
SSBP4-201ENST00000270061 USP44Q9H0E7 712 aa30.47■■■□□ 2.47
SSBP4-201ENST00000270061 TAF1DQ9H5J8 278 aaPredicted RBP30.47■■■□□ 2.47
SSBP4-201ENST00000270061 PODXL2Q9NZ53 605 aa30.47■■■□□ 2.47
SSBP4-201ENST00000270061 GRM8O00222 908 aa30.46■■■□□ 2.47
SSBP4-201ENST00000270061 TBC1D16Q8TBP0 767 aa30.46■■■□□ 2.47
SSBP4-201ENST00000270061 EYA3Q99504 573 aa30.46■■■□□ 2.47
SSBP4-201ENST00000270061 DCTPP1Q9H773 170 aa30.46■■■□□ 2.47
SSBP4-201ENST00000270061 C9orf78Q9NZ63 289 aaPredicted RBP30.46■■■□□ 2.47
SSBP4-201ENST00000270061 CSF1RP07333 972 aa30.44■■■□□ 2.46
SSBP4-201ENST00000270061 BSDC1Q9NW68 430 aaPredicted RBP30.44■■■□□ 2.46
SSBP4-201ENST00000270061 ITGA6P23229 1130 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 APLP1P51693 650 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 CXCL9Q07325 125 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 FAM161AQ3B820 660 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 GGA1Q9UJY5 639 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 RIMBP2O15034 1052 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 UFL1O94874 794 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 EPHX2P34913 555 aa30.43■■■□□ 2.46
SSBP4-201ENST00000270061 POTEIP0CG38 1075 aa30.42■■■□□ 2.46
SSBP4-201ENST00000270061 POTEJP0CG39 1038 aa30.42■■■□□ 2.46
SSBP4-201ENST00000270061 LMOD1P29536 600 aaPredicted RBP30.42■■■□□ 2.46
SSBP4-201ENST00000270061 IGHMBP2P38935 993 aaKnown RBP30.42■■■□□ 2.46
SSBP4-201ENST00000270061 XDHP47989 1333 aa30.42■■■□□ 2.46
SSBP4-201ENST00000270061 HMMRO75330 724 aa30.41■■■□□ 2.46
SSBP4-201ENST00000270061 CHD1LQ86WJ1 897 aa30.41■■■□□ 2.46
SSBP4-201ENST00000270061 CIAPIN1Q6FI81 312 aa30.41■■■□□ 2.46
SSBP4-201ENST00000270061 GPR101Q96P66 508 aaPredicted RBP30.41■■■□□ 2.46
SSBP4-201ENST00000270061 ZC3H12CQ9C0D7 883 aaKnown RBP30.41■■■□□ 2.46
SSBP4-201ENST00000270061 UBTFL1P0CB47 393 aaPredicted RBP30.4■■■□□ 2.46
SSBP4-201ENST00000270061 SCNN1DP51172 638 aa30.4■■■□□ 2.46
SSBP4-201ENST00000270061 FOXO4P98177 505 aa30.4■■■□□ 2.46
SSBP4-201ENST00000270061 EAPPQ56P03 285 aaPredicted RBP30.4■■■□□ 2.46
SSBP4-201ENST00000270061 CHADLQ6NUI6 762 aa30.4■■■□□ 2.46
SSBP4-201ENST00000270061 DBNDD1Q9H9R9 158 aa30.4■■■□□ 2.46
SSBP4-201ENST00000270061 RAD17O75943 681 aa30.39■■■□□ 2.46
SSBP4-201ENST00000270061 TNIP1Q15025 636 aa30.39■■■□□ 2.46
SSBP4-201ENST00000270061 PNMA8AQ86V59 439 aaPredicted RBP30.39■■■□□ 2.46
SSBP4-201ENST00000270061 LDHDQ86WU2 507 aa30.39■■■□□ 2.46
SSBP4-201ENST00000270061 MINPP1Q9UNW1 487 aa30.39■■■□□ 2.46
SSBP4-201ENST00000270061 YDJCA8MPS7 323 aa30.38■■■□□ 2.45
SSBP4-201ENST00000270061 MPHOSPH8Q99549 860 aa30.38■■■□□ 2.45
SSBP4-201ENST00000270061 CHMP3Q9Y3E7 222 aa30.38■■■□□ 2.45
SSBP4-201ENST00000270061 ANKRD18BA2A2Z9 1011 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms