RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 COPRSQ9NQ92 184 aa20.52■□□□□ 0.88
SNRPF-201ENST00000266735 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.88
SNRPF-201ENST00000266735 FBXO3Q9UK99 471 aa20.52■□□□□ 0.88
SNRPF-201ENST00000266735 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
SNRPF-201ENST00000266735 MYH3P11055 1940 aa20.52■□□□□ 0.88
SNRPF-201ENST00000266735 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 GPSM2P81274 684 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 SUPT20HQ8NEM7 779 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 RTFDC1Q9BY42 306 aaPredicted RBP20.51■□□□□ 0.87
SNRPF-201ENST00000266735 ANKRD2Q9GZV1 360 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 ARFGEF1Q9Y6D6 1849 aa20.51■□□□□ 0.87
SNRPF-201ENST00000266735 XDHP47989 1333 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 RASSF7Q02833 373 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 CHRNDQ07001 517 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 AAMPQ13685 434 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 POLA2Q14181 598 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 SSH3Q8TE77 659 aa20.5■□□□□ 0.87
SNRPF-201ENST00000266735 EYA2O00167 538 aa20.49■□□□□ 0.87
SNRPF-201ENST00000266735 CIAO1O76071 339 aa20.49■□□□□ 0.87
SNRPF-201ENST00000266735 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
SNRPF-201ENST00000266735 RIPOR2Q9Y4F9 1068 aa20.49■□□□□ 0.87
SNRPF-201ENST00000266735 MROH5Q6ZUA9 1318 aa20.49■□□□□ 0.87
SNRPF-201ENST00000266735 GGA1Q9UJY5 639 aa20.48■□□□□ 0.87
SNRPF-201ENST00000266735 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
SNRPF-201ENST00000266735 HMMRO75330 724 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 LMNB1P20700 586 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 ATP2B4P23634 1241 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 LRRC24Q50LG9 513 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 TBC1D16Q8TBP0 767 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 VPS33BQ9H267 617 aa20.47■□□□□ 0.87
SNRPF-201ENST00000266735 PA2G4Q9UQ80 394 aaKnown RBP20.47■□□□□ 0.87
SNRPF-201ENST00000266735 UFL1O94874 794 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
SNRPF-201ENST00000266735 EYA3Q99504 573 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 SIL1Q9H173 461 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
SNRPF-201ENST00000266735 POLLQ9UGP5 575 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 C6orf229H3BNL8 230 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 METTL24Q5JXM2 366 aa20.46■□□□□ 0.87
SNRPF-201ENST00000266735 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.86
SNRPF-201ENST00000266735 ATG9AQ7Z3C6 839 aa20.45■□□□□ 0.86
SNRPF-201ENST00000266735 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
SNRPF-201ENST00000266735 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
SNRPF-201ENST00000266735 CACNA1SQ13698 1873 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 UTRNP46939 3433 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 TAF5LO75529 589 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 KCNJ4P48050 445 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 PRELPP51888 382 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
SNRPF-201ENST00000266735 TAF1P21675 1872 aa20.44■□□□□ 0.86
SNRPF-201ENST00000266735 ZNF804BA4D1E1 1349 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 PPIP5K2O43314 1243 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 SURF6O75683 361 aaKnown RBP20.43■□□□□ 0.86
SNRPF-201ENST00000266735 PDE8BO95263 885 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 IRX6P78412 446 aaPredicted RBP20.43■□□□□ 0.86
SNRPF-201ENST00000266735 KIAA2012Q0VF49 1180 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNRPF-201ENST00000266735 WASHC4Q2M389 1173 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 C9orf131Q5VYM1 1079 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 VGLL2Q8N8G2 317 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
SNRPF-201ENST00000266735 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
SNRPF-201ENST00000266735 LARGE2Q8N3Y3 721 aa20.42■□□□□ 0.86
SNRPF-201ENST00000266735 ZC3H12CQ9C0D7 883 aaKnown RBP20.42■□□□□ 0.86
SNRPF-201ENST00000266735 CEP126Q9P2H0 1117 aa20.42■□□□□ 0.86
SNRPF-201ENST00000266735 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
SNRPF-201ENST00000266735 UBE4AQ14139 1066 aa20.41■□□□□ 0.86
SNRPF-201ENST00000266735 AOC3Q16853 763 aa20.41■□□□□ 0.86
SNRPF-201ENST00000266735 FER1L6Q2WGJ9 1857 aa20.4■□□□□ 0.86
SNRPF-201ENST00000266735 MED23Q9ULK4 1368 aa20.4■□□□□ 0.86
SNRPF-201ENST00000266735 LTBP1Q14766 1721 aa20.4■□□□□ 0.86
SNRPF-201ENST00000266735 OS9Q13438 667 aaPredicted RBP20.4■□□□□ 0.86
SNRPF-201ENST00000266735 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
SNRPF-201ENST00000266735 HSP90AB4PQ58FF6 505 aa20.4■□□□□ 0.86
SNRPF-201ENST00000266735 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
SNRPF-201ENST00000266735 C15orf52Q6ZUT6 534 aaKnown RBP20.39■□□□□ 0.85
SNRPF-201ENST00000266735 GPR101Q96P66 508 aaPredicted RBP20.39■□□□□ 0.85
SNRPF-201ENST00000266735 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
SNRPF-201ENST00000266735 WTIPA6NIX2 430 aaPredicted RBP20.38■□□□□ 0.85
SNRPF-201ENST00000266735 SNAP23O00161 211 aa20.38■□□□□ 0.85
SNRPF-201ENST00000266735 RIMBP2O15034 1052 aa20.38■□□□□ 0.85
SNRPF-201ENST00000266735 ERC1Q8IUD2 1116 aa20.38■□□□□ 0.85
SNRPF-201ENST00000266735 NIM1KQ8IY84 436 aa20.38■□□□□ 0.85
SNRPF-201ENST00000266735 LPIN2Q92539 896 aa20.37■□□□□ 0.85
SNRPF-201ENST00000266735 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
SNRPF-201ENST00000266735 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
SNRPF-201ENST00000266735 G3V3G9 751 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 SASH1O94885 1247 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
SNRPF-201ENST00000266735 FGFR2P21802 821 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 TFCP2Q12800 502 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 DCAF8Q5TAQ9 597 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
SNRPF-201ENST00000266735 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
SNRPF-201ENST00000266735 SLC5A1P13866 664 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms