RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 SPATA31A1Q5TZJ5 1347 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 NRDCO43847 1150 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 AOX1Q06278 1338 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
PDLIM2-201ENST00000265810 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 HLFQ16534 295 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 LPIN2Q92539 896 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 PUS3Q9BZE2 481 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 CDKL5O76039 1030 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 ANAPC15P60006 121 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
PDLIM2-201ENST00000265810 MYOM1P52179 1685 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 VPS72Q15906 364 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 CREBRFQ8IUR6 639 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 ZNF444Q8N0Y2 327 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 SPATA31A6Q5VVP1 1343 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 ERVV-1B6SEH8 477 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 TPM4P67936 248 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
PDLIM2-201ENST00000265810 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 CRNKL1Q9BZJ0 848 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 MROH5Q6ZUA9 1318 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 BAG6P46379 1132 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 BRF1Q92994 677 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 MPHOSPH10O00566 681 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 UFL1O94874 794 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
PDLIM2-201ENST00000265810 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 ATP5JP18859 108 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
PDLIM2-201ENST00000265810 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 STK38Q15208 465 aa17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.31
PDLIM2-201ENST00000265810 MCM4P33991 863 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 ZAP70P43403 619 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 KRT85P78386 507 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 BECN2A8MW95 431 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 SGSM2O43147 1006 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 GSTO1P78417 241 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
PDLIM2-201ENST00000265810 RAD50Q92878 1312 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 MAGEB6P1A0A0J9YX57 407 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 H7C1W4 665 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 POLD1P28340 1107 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 DENND2AQ9ULE3 1009 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 MBD3O95983 291 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 MSNP26038 577 aaKnown RBP17■□□□□ 0.31
PDLIM2-201ENST00000265810 MCM5P33992 734 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 SDF4Q9BRK5 362 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
PDLIM2-201ENST00000265810 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
PDLIM2-201ENST00000265810 SSFA2P28290 1259 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 SUSD4Q5VX71 490 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 CCDC144CPQ8IYA2 1237 aa16.99■□□□□ 0.31
PDLIM2-201ENST00000265810 SEC31BQ9NQW1 1179 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms