RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
USE1-201ENST00000263897 GREM2Q9H772 168 aa20.47■□□□□ 0.87
USE1-201ENST00000263897 DBNDD1Q9H9R9 158 aa20.47■□□□□ 0.87
USE1-201ENST00000263897 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
USE1-201ENST00000263897 JMYQ8N9B5 988 aa20.46■□□□□ 0.87
USE1-201ENST00000263897 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
USE1-201ENST00000263897 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
USE1-201ENST00000263897 BSDC1Q9NW68 430 aaPredicted RBP20.46■□□□□ 0.87
USE1-201ENST00000263897 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
USE1-201ENST00000263897 UFL1O94874 794 aa20.45■□□□□ 0.86
USE1-201ENST00000263897 CSF1RP07333 972 aa20.45■□□□□ 0.86
USE1-201ENST00000263897 SLFN5Q08AF3 891 aa20.45■□□□□ 0.86
USE1-201ENST00000263897 DOK7Q18PE1 504 aa20.45■□□□□ 0.86
USE1-201ENST00000263897 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
USE1-201ENST00000263897 ADARB2Q9NS39 739 aaKnown RBP20.45■□□□□ 0.86
USE1-201ENST00000263897 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
USE1-201ENST00000263897 XDHP47989 1333 aa20.44■□□□□ 0.86
USE1-201ENST00000263897 PSMD14O00487 310 aa20.43■□□□□ 0.86
USE1-201ENST00000263897 ECE2O60344 883 aa20.43■□□□□ 0.86
USE1-201ENST00000263897 ATP2B4P23634 1241 aa20.43■□□□□ 0.86
USE1-201ENST00000263897 KCNQ5Q9NR82 932 aa20.43■□□□□ 0.86
USE1-201ENST00000263897 CNOT7Q9UIV1 285 aaKnown RBP20.43■□□□□ 0.86
USE1-201ENST00000263897 G3V3G9 751 aa20.42■□□□□ 0.86
USE1-201ENST00000263897 ITGA6P23229 1130 aa20.42■□□□□ 0.86
USE1-201ENST00000263897 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
USE1-201ENST00000263897 DPF2Q92785 391 aa20.42■□□□□ 0.86
USE1-201ENST00000263897 CDCA7LQ96GN5 454 aa20.42■□□□□ 0.86
USE1-201ENST00000263897 TMEM88BA6NKF7 163 aa20.41■□□□□ 0.86
USE1-201ENST00000263897 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
USE1-201ENST00000263897 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
USE1-201ENST00000263897 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
USE1-201ENST00000263897 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
USE1-201ENST00000263897 WTIPA6NIX2 430 aaPredicted RBP20.4■□□□□ 0.86
USE1-201ENST00000263897 H7C1D1 291 aa20.4■□□□□ 0.86
USE1-201ENST00000263897 FOXO4P98177 505 aa20.4■□□□□ 0.86
USE1-201ENST00000263897 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
USE1-201ENST00000263897 SLC4A10Q6U841 1118 aa20.4■□□□□ 0.86
USE1-201ENST00000263897 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
USE1-201ENST00000263897 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
USE1-201ENST00000263897 GRM8O00222 908 aa20.39■□□□□ 0.85
USE1-201ENST00000263897 RPS12P25398 132 aaKnown RBP20.39■□□□□ 0.85
USE1-201ENST00000263897 HIRAP54198 1017 aaPredicted RBP20.39■□□□□ 0.85
USE1-201ENST00000263897 SRCIN1Q9C0H9 1055 aa20.39■□□□□ 0.85
USE1-201ENST00000263897 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
USE1-201ENST00000263897 ANKRD18BA2A2Z9 1011 aa20.38■□□□□ 0.85
USE1-201ENST00000263897 VIL1P09327 827 aaKnown RBP20.38■□□□□ 0.85
USE1-201ENST00000263897 CCT4P50991 539 aaKnown RBP20.38■□□□□ 0.85
USE1-201ENST00000263897 MICALL2Q8IY33 904 aa20.38■□□□□ 0.85
USE1-201ENST00000263897 ZC3H15Q8WU90 426 aaKnown RBP20.38■□□□□ 0.85
USE1-201ENST00000263897 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
USE1-201ENST00000263897 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
USE1-201ENST00000263897 C9orf78Q9NZ63 289 aaPredicted RBP20.38■□□□□ 0.85
USE1-201ENST00000263897 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
USE1-201ENST00000263897 SCN9AQ15858 1988 aa20.37■□□□□ 0.85
USE1-201ENST00000263897 ANKRD2Q9GZV1 360 aa20.37■□□□□ 0.85
USE1-201ENST00000263897 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
USE1-201ENST00000263897 SPEF2Q9C093 1822 aa20.37■□□□□ 0.85
USE1-201ENST00000263897 IFIT5Q13325 482 aaKnown RBP20.36■□□□□ 0.85
USE1-201ENST00000263897 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
USE1-201ENST00000263897 LMBR1LQ6UX01 489 aa20.36■□□□□ 0.85
USE1-201ENST00000263897 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
USE1-201ENST00000263897 TRPM4Q8TD43 1214 aa20.36■□□□□ 0.85
USE1-201ENST00000263897 PTPRCP08575 1304 aa20.35■□□□□ 0.85
USE1-201ENST00000263897 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.85
USE1-201ENST00000263897 SAMD7Q7Z3H4 446 aa20.35■□□□□ 0.85
USE1-201ENST00000263897 MED23Q9ULK4 1368 aa20.34■□□□□ 0.85
USE1-201ENST00000263897 TRAF5O00463 557 aa20.34■□□□□ 0.85
USE1-201ENST00000263897 ALDH1L2Q3SY69 923 aa20.34■□□□□ 0.85
USE1-201ENST00000263897 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
USE1-201ENST00000263897 CNTNAP1P78357 1384 aa20.34■□□□□ 0.85
USE1-201ENST00000263897 CHRNDQ07001 517 aa20.33■□□□□ 0.85
USE1-201ENST00000263897 TBC1D10BQ4KMP7 808 aaPredicted RBP20.33■□□□□ 0.85
USE1-201ENST00000263897 AGBL3Q8NEM8 1001 aa20.33■□□□□ 0.85
USE1-201ENST00000263897 ZNF804BA4D1E1 1349 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 UTYO14607 1347 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 NBPF7P0C2Y1 421 aaPredicted RBP20.32■□□□□ 0.84
USE1-201ENST00000263897 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 DEFB115Q30KQ5 88 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 CST9Q5W186 159 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 RSBN1LQ6PCB5 846 aaPredicted RBP20.32■□□□□ 0.84
USE1-201ENST00000263897 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 TXNRD3Q86VQ6 643 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 GLIS2Q9BZE0 524 aaPredicted RBP20.32■□□□□ 0.84
USE1-201ENST00000263897 COA1Q9GZY4 146 aa20.32■□□□□ 0.84
USE1-201ENST00000263897 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
USE1-201ENST00000263897 EGFRP00533 1210 aa20.31■□□□□ 0.84
USE1-201ENST00000263897 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
USE1-201ENST00000263897 RBM26Q5T8P6 1007 aaKnown RBP20.31■□□□□ 0.84
USE1-201ENST00000263897 KAZALD1Q96I82 304 aa20.31■□□□□ 0.84
USE1-201ENST00000263897 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
USE1-201ENST00000263897 GMLQ99445 158 aa20.31■□□□□ 0.84
USE1-201ENST00000263897 TRPM7Q96QT4 1865 aa20.3■□□□□ 0.84
USE1-201ENST00000263897 POLR2AP24928 1970 aaKnown RBP20.3■□□□□ 0.84
USE1-201ENST00000263897 VEGFBP49765 207 aa20.3■□□□□ 0.84
USE1-201ENST00000263897 ZNF594Q96JF6 807 aaPredicted RBP20.3■□□□□ 0.84
USE1-201ENST00000263897 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
USE1-201ENST00000263897 PSME4Q14997 1843 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms