RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
SIM1-201ENST00000262901 ATP2B1P20020 1258 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 LARP1BQ659C4 914 aaKnown RBP11.26□□□□□ -0.61
SIM1-201ENST00000262901 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 ATRNO75882 1429 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 PSMA5P28066 241 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
SIM1-201ENST00000262901 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
SIM1-201ENST00000262901 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
SIM1-201ENST00000262901 ANKRD44Q8N8A2 993 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 YY1AP1Q9H869 796 aa11.26□□□□□ -0.61
SIM1-201ENST00000262901 PLCH1Q4KWH8 1693 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 STK11IPQ8N1F8 1099 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 CCDC191Q8NCU4 936 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 RBM27Q9P2N5 1060 aaKnown RBP11.25□□□□□ -0.61
SIM1-201ENST00000262901 TRAPPC3LQ5T215 181 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 TPD52L1Q16890 204 aaPredicted RBP11.25□□□□□ -0.61
SIM1-201ENST00000262901 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 SYNE3Q6ZMZ3 975 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 ERC1Q8IUD2 1116 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
SIM1-201ENST00000262901 MAP3K15Q6ZN16 1313 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
SIM1-201ENST00000262901 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
SIM1-201ENST00000262901 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
SIM1-201ENST00000262901 NUCB1Q02818 461 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 TRIM29Q14134 588 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 GCKRQ14397 625 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
SIM1-201ENST00000262901 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
SIM1-201ENST00000262901 NEURL1BA8MQ27 555 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 GOLIM4O00461 696 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
SIM1-201ENST00000262901 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
SIM1-201ENST00000262901 PDCP20941 246 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 BAG6P46379 1132 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 KCNQ4P56696 695 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 ZNF771Q7L3S4 317 aaPredicted RBP11.23□□□□□ -0.61
SIM1-201ENST00000262901 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 PARP10Q53GL7 1025 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
SIM1-201ENST00000262901 USP44Q9H0E7 712 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 LRRFIP1Q32MZ4 808 aaKnown RBP11.23□□□□□ -0.61
SIM1-201ENST00000262901 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
SIM1-201ENST00000262901 PDRG1Q9NUG6 133 aa11.23□□□□□ -0.61
SIM1-201ENST00000262901 PDIA6Q15084 440 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 PRPF40BQ6NWY9 871 aaKnown RBP11.22□□□□□ -0.61
SIM1-201ENST00000262901 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
SIM1-201ENST00000262901 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 SETDB2Q96T68 719 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 MRC1P22897 1456 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
SIM1-201ENST00000262901 UQCRHP07919 91 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 SDSP20132 328 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 KRT85P78386 507 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 CAMK4Q16566 473 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 NBPF7P0C2Y1 421 aaPredicted RBP11.22□□□□□ -0.61
SIM1-201ENST00000262901 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
SIM1-201ENST00000262901 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
SIM1-201ENST00000262901 RPS6KA4O75676 772 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 RAB11FIP3O75154 756 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 OFD1O75665 1012 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 TPM3P06753 285 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
SIM1-201ENST00000262901 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
SIM1-201ENST00000262901 TNMDQ9H2S6 317 aa11.21□□□□□ -0.61
SIM1-201ENST00000262901 ITPK1Q13572 414 aa11.21□□□□□ -0.62
SIM1-201ENST00000262901 TTC22Q5TAA0 569 aa11.21□□□□□ -0.62
SIM1-201ENST00000262901 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.62
SIM1-201ENST00000262901 ADCY9O60503 1353 aa11.21□□□□□ -0.62
SIM1-201ENST00000262901 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
SIM1-201ENST00000262901 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
SIM1-201ENST00000262901 DNAJC14Q6Y2X3 702 aaPredicted RBP11.2□□□□□ -0.62
SIM1-201ENST00000262901 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 STK32BQ9NY57 414 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
SIM1-201ENST00000262901 IFIT5Q13325 482 aaKnown RBP11.2□□□□□ -0.62
SIM1-201ENST00000262901 ME1P48163 572 aa11.19□□□□□ -0.62
SIM1-201ENST00000262901 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms