RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 OTUD7AQ8TE49 926 aaPredicted RBP33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 RBM17Q96I25 401 aaKnown RBP33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 PDE4AP27815 886 aa33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 GRAPQ13588 217 aa33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 HSP90AB4PQ58FF6 505 aa33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 GRAPLQ8TC17 118 aaPredicted RBP33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 ZNF622Q969S3 477 aaKnown RBP eCLIP33.92■■■■□ 3.02
SMARCD3-201ENST00000262188 KIF1BPQ96EK5 621 aa33.91■■■■□ 3.02
SMARCD3-201ENST00000262188 CIAO1O76071 339 aa33.91■■■■□ 3.02
SMARCD3-201ENST00000262188 HOXA10P31260 410 aaPredicted RBP33.9■■■■□ 3.02
SMARCD3-201ENST00000262188 IL15P40933 162 aaPredicted RBP33.9■■■■□ 3.02
SMARCD3-201ENST00000262188 SPON1Q9HCB6 807 aa33.9■■■■□ 3.02
SMARCD3-201ENST00000262188 A0A0G2JLW4 131 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 H0YIN7 160 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 WWC3Q9ULE0 1092 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 SNAP23O00161 211 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 NPR1P16066 1061 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 RGS3P49796 1198 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 METTL24Q5JXM2 366 aa33.89■■■■□ 3.02
SMARCD3-201ENST00000262188 TAF5LO75529 589 aa33.88■■■■□ 3.01
SMARCD3-201ENST00000262188 WTIPA6NIX2 430 aaPredicted RBP33.87■■■■□ 3.01
SMARCD3-201ENST00000262188 ERC1Q8IUD2 1116 aa33.87■■■■□ 3.01
SMARCD3-201ENST00000262188 MASTLQ96GX5 879 aa33.87■■■■□ 3.01
SMARCD3-201ENST00000262188 BSDC1Q9NW68 430 aaPredicted RBP33.87■■■■□ 3.01
SMARCD3-201ENST00000262188 DPEP1P16444 411 aa33.86■■■■□ 3.01
SMARCD3-201ENST00000262188 OLFM4Q6UX06 510 aa33.86■■■■□ 3.01
SMARCD3-201ENST00000262188 CRAMP1Q96RY5 1269 aa33.86■■■■□ 3.01
SMARCD3-201ENST00000262188 CACNA1SQ13698 1873 aa33.86■■■■□ 3.01
SMARCD3-201ENST00000262188 CHRNDQ07001 517 aa33.85■■■■□ 3.01
SMARCD3-201ENST00000262188 ZBTB47Q9UFB7 747 aaPredicted RBP33.85■■■■□ 3.01
SMARCD3-201ENST00000262188 KIF13BQ9NQT8 1826 aa33.85■■■■□ 3.01
SMARCD3-201ENST00000262188 EAF2Q96CJ1 260 aaPredicted RBP33.85■■■■□ 3.01
SMARCD3-201ENST00000262188 MINPP1Q9UNW1 487 aa33.85■■■■□ 3.01
SMARCD3-201ENST00000262188 TLR7Q9NYK1 1049 aaKnown RBP33.84■■■■□ 3.01
SMARCD3-201ENST00000262188 CEP126Q9P2H0 1117 aa33.84■■■■□ 3.01
SMARCD3-201ENST00000262188 FBXO3Q9UK99 471 aa33.84■■■■□ 3.01
SMARCD3-201ENST00000262188 VGLL2Q8N8G2 317 aa33.83■■■■□ 3.01
SMARCD3-201ENST00000262188 CCDC8Q9H0W5 538 aaPredicted RBP33.83■■■■□ 3.01
SMARCD3-201ENST00000262188 TSHZ3Q63HK5 1081 aa33.83■■■■□ 3.01
SMARCD3-201ENST00000262188 AACSQ86V21 672 aa33.83■■■■□ 3.01
SMARCD3-201ENST00000262188 ZNF219Q9P2Y4 722 aaPredicted RBP33.83■■■■□ 3.01
SMARCD3-201ENST00000262188 KCNA3P22001 575 aa33.82■■■■□ 3
SMARCD3-201ENST00000262188 TIMM10P62072 90 aa33.81■■■■□ 3
SMARCD3-201ENST00000262188 TNNI3KQ59H18 835 aa33.81■■■■□ 3
SMARCD3-201ENST00000262188 FPGT-TNNI3KV9GXZ4 949 aa33.81■■■■□ 3
SMARCD3-201ENST00000262188 CLASRPQ8N2M8 674 aaKnown RBP33.81■■■■□ 3
SMARCD3-201ENST00000262188 PPEF1O14829 653 aaPredicted RBP33.8■■■■□ 3
SMARCD3-201ENST00000262188 STYK1Q6J9G0 422 aa33.8■■■■□ 3
SMARCD3-201ENST00000262188 KIAA1551Q9HCM1 1747 aa33.8■■■■□ 3
SMARCD3-201ENST00000262188 MROH5Q6ZUA9 1318 aa33.8■■■■□ 3
SMARCD3-201ENST00000262188 SLX4Q8IY92 1834 aa33.79■■■■□ 3
SMARCD3-201ENST00000262188 PDE8BO95263 885 aa33.79■■■■□ 3
SMARCD3-201ENST00000262188 PRPF40BQ6NWY9 871 aaKnown RBP33.79■■■■□ 3
SMARCD3-201ENST00000262188 ALDH1B1P30837 517 aa33.78■■■■□ 3
SMARCD3-201ENST00000262188 NLGN2Q8NFZ4 835 aa33.78■■■■□ 3
SMARCD3-201ENST00000262188 BBOX1O75936 387 aa33.78■■■■□ 3
SMARCD3-201ENST00000262188 NEUROD6Q96NK8 337 aa33.78■■■■□ 3
SMARCD3-201ENST00000262188 A0A1B0GUL6 1792 aa33.77■■■■□ 3
SMARCD3-201ENST00000262188 ZNF609O15014 1411 aa33.77■■■■□ 3
SMARCD3-201ENST00000262188 A0A1B0GUL7 405 aa33.76■■■■□ 3
SMARCD3-201ENST00000262188 ADORA1P30542 326 aa33.76■■■■□ 3
SMARCD3-201ENST00000262188 PLEKHM2Q8IWE5 1019 aa33.76■■■□□ 2.99
SMARCD3-201ENST00000262188 DBNDD2Q9BQY9 259 aa33.76■■■□□ 2.99
SMARCD3-201ENST00000262188 ATP2B3Q16720 1220 aa33.75■■■□□ 2.99
SMARCD3-201ENST00000262188 PKNOX2Q96KN3 472 aa33.75■■■□□ 2.99
SMARCD3-201ENST00000262188 DBNLQ9UJU6 430 aaKnown RBP33.75■■■□□ 2.99
SMARCD3-201ENST00000262188 DLEC1Q9Y238 1755 aa33.75■■■□□ 2.99
SMARCD3-201ENST00000262188 IFIT2P09913 472 aaKnown RBP33.74■■■□□ 2.99
SMARCD3-201ENST00000262188 GPSM2P81274 684 aa33.74■■■□□ 2.99
SMARCD3-201ENST00000262188 CD2APQ9Y5K6 639 aa33.74■■■□□ 2.99
SMARCD3-201ENST00000262188 SALL3Q9BXA9 1300 aa33.74■■■□□ 2.99
SMARCD3-201ENST00000262188 TGFB2P61812 414 aa33.74■■■□□ 2.99
SMARCD3-201ENST00000262188 CNKSR1Q969H4 720 aa33.73■■■□□ 2.99
SMARCD3-201ENST00000262188 GPR101Q96P66 508 aaPredicted RBP33.73■■■□□ 2.99
SMARCD3-201ENST00000262188 ANKIB1Q9P2G1 1089 aa33.73■■■□□ 2.99
SMARCD3-201ENST00000262188 FHDC1Q9C0D6 1143 aaPredicted RBP33.72■■■□□ 2.99
SMARCD3-201ENST00000262188 ATP6V0A2Q9Y487 856 aa33.72■■■□□ 2.99
SMARCD3-201ENST00000262188 NSFL1CQ9UNZ2 370 aaKnown RBP33.72■■■□□ 2.99
SMARCD3-201ENST00000262188 FGFR2P21802 821 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 KLRK1P26718 216 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 PUM3Q15397 648 aaKnown RBP33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 MX1P20591 662 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 SP8Q8IXZ3 490 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 TTLL6Q8N841 843 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 GPR108Q9NPR9 543 aa33.71■■■□□ 2.99
SMARCD3-201ENST00000262188 AKAP2Q9Y2D5 859 aa33.7■■■□□ 2.99
SMARCD3-201ENST00000262188 PDE1AP54750 535 aa33.69■■■□□ 2.98
SMARCD3-201ENST00000262188 XAGE2Q96GT9 111 aa33.69■■■□□ 2.98
SMARCD3-201ENST00000262188 C21orf2O43822 256 aa33.69■■■□□ 2.98
SMARCD3-201ENST00000262188 LRRC37AA6NMS7 1700 aa33.68■■■□□ 2.98
SMARCD3-201ENST00000262188 ANKRD2Q9GZV1 360 aa33.68■■■□□ 2.98
SMARCD3-201ENST00000262188 KCNJ4P48050 445 aa33.67■■■□□ 2.98
SMARCD3-201ENST00000262188 C7orf43Q8WVR3 580 aa33.67■■■□□ 2.98
SMARCD3-201ENST00000262188 LPIN2Q92539 896 aa33.67■■■□□ 2.98
SMARCD3-201ENST00000262188 PIM2Q9P1W9 311 aa33.67■■■□□ 2.98
SMARCD3-201ENST00000262188 XDHP47989 1333 aa33.66■■■□□ 2.98
SMARCD3-201ENST00000262188 ZNF804BA4D1E1 1349 aa33.65■■■□□ 2.98
SMARCD3-201ENST00000262188 TXNRD3Q86VQ6 643 aa33.65■■■□□ 2.98
SMARCD3-201ENST00000262188 DAXXQ9UER7 740 aaPredicted RBP33.65■■■□□ 2.98
SMARCD3-201ENST00000262188 POLLQ9UGP5 575 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms