RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 NEURL1BA8MQ27 555 aa21.67■■□□□ 1.06
CGREF1-201ENST00000260595 ECE2O60344 883 aa21.67■■□□□ 1.06
CGREF1-201ENST00000260595 DOK7Q18PE1 504 aa21.67■■□□□ 1.06
CGREF1-201ENST00000260595 SALL2Q9Y467 1007 aaPredicted RBP21.67■■□□□ 1.06
CGREF1-201ENST00000260595 RTL9Q8NET4 1388 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 VAMP4O75379 141 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 CTSWP56202 376 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 NEXNQ0ZGT2 675 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 MICALL2Q8IY33 904 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
CGREF1-201ENST00000260595 ZC3H15Q8WU90 426 aaKnown RBP21.66■■□□□ 1.06
CGREF1-201ENST00000260595 ABT1Q9ULW3 272 aaKnown RBP21.66■■□□□ 1.06
CGREF1-201ENST00000260595 H7C1W4 665 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 UFL1O94874 794 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 FLIIQ13045 1269 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 ANKRD18AQ8IVF6 992 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 ZC3H12CQ9C0D7 883 aaKnown RBP21.65■■□□□ 1.06
CGREF1-201ENST00000260595 ANKIB1Q9P2G1 1089 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 GGA1Q9UJY5 639 aa21.65■■□□□ 1.06
CGREF1-201ENST00000260595 H7C1D1 291 aa21.64■■□□□ 1.05
CGREF1-201ENST00000260595 FOXN1O15353 648 aa21.64■■□□□ 1.05
CGREF1-201ENST00000260595 GLIS2Q9BZE0 524 aaPredicted RBP21.64■■□□□ 1.05
CGREF1-201ENST00000260595 SPINK5Q9NQ38 1064 aaPredicted RBP21.64■■□□□ 1.05
CGREF1-201ENST00000260595 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
CGREF1-201ENST00000260595 RPS12P25398 132 aaKnown RBP21.63■■□□□ 1.05
CGREF1-201ENST00000260595 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
CGREF1-201ENST00000260595 SAMD7Q7Z3H4 446 aa21.63■■□□□ 1.05
CGREF1-201ENST00000260595 GREM2Q9H772 168 aa21.63■■□□□ 1.05
CGREF1-201ENST00000260595 WBP1LQ9NX94 342 aa21.63■■□□□ 1.05
CGREF1-201ENST00000260595 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
CGREF1-201ENST00000260595 GCKRQ14397 625 aa21.62■■□□□ 1.05
CGREF1-201ENST00000260595 TNS4Q8IZW8 715 aa21.62■■□□□ 1.05
CGREF1-201ENST00000260595 CDC5LQ99459 802 aaKnown RBP21.62■■□□□ 1.05
CGREF1-201ENST00000260595 TLL2Q9Y6L7 1015 aa21.62■■□□□ 1.05
CGREF1-201ENST00000260595 XDHP47989 1333 aa21.61■■□□□ 1.05
CGREF1-201ENST00000260595 EGFRP00533 1210 aa21.61■■□□□ 1.05
CGREF1-201ENST00000260595 CASP7P55210 303 aa21.61■■□□□ 1.05
CGREF1-201ENST00000260595 UBE3BQ7Z3V4 1068 aa21.61■■□□□ 1.05
CGREF1-201ENST00000260595 DNAAF4Q8WXU2 420 aa21.61■■□□□ 1.05
CGREF1-201ENST00000260595 BSDC1Q9NW68 430 aaPredicted RBP21.61■■□□□ 1.05
CGREF1-201ENST00000260595 WTIPA6NIX2 430 aaPredicted RBP21.6■■□□□ 1.05
CGREF1-201ENST00000260595 ATP2B4P23634 1241 aa21.6■■□□□ 1.05
CGREF1-201ENST00000260595 FKBP5Q13451 457 aaPredicted RBP21.6■■□□□ 1.05
CGREF1-201ENST00000260595 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
CGREF1-201ENST00000260595 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
CGREF1-201ENST00000260595 MINPP1Q9UNW1 487 aa21.6■■□□□ 1.05
CGREF1-201ENST00000260595 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
CGREF1-201ENST00000260595 TBC1D10BQ4KMP7 808 aaPredicted RBP21.59■■□□□ 1.05
CGREF1-201ENST00000260595 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
CGREF1-201ENST00000260595 LINS1Q8NG48 757 aa21.59■■□□□ 1.05
CGREF1-201ENST00000260595 CAPNS2Q96L46 248 aa21.59■■□□□ 1.05
CGREF1-201ENST00000260595 CYP4F22Q6NT55 531 aa21.58■■□□□ 1.05
CGREF1-201ENST00000260595 SAPCD2Q86UD0 394 aa21.58■■□□□ 1.05
CGREF1-201ENST00000260595 TRPM7Q96QT4 1865 aa21.58■■□□□ 1.04
CGREF1-201ENST00000260595 SCN9AQ15858 1988 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 G3V3G9 751 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 CSF1RP07333 972 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 DCAF8Q5TAQ9 597 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 DLK2Q6UY11 383 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 USP48Q86UV5 1035 aa21.57■■□□□ 1.04
CGREF1-201ENST00000260595 ZNF609O15014 1411 aa21.56■■□□□ 1.04
CGREF1-201ENST00000260595 ECE1P42892 770 aa21.56■■□□□ 1.04
CGREF1-201ENST00000260595 CTCFP49711 727 aaPredicted RBP21.56■■□□□ 1.04
CGREF1-201ENST00000260595 RBM26Q5T8P6 1007 aaKnown RBP21.56■■□□□ 1.04
CGREF1-201ENST00000260595 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
CGREF1-201ENST00000260595 MYH16Q9H6N6 1097 aa21.56■■□□□ 1.04
CGREF1-201ENST00000260595 PRDM10Q9NQV6 1147 aa21.56■■□□□ 1.04
CGREF1-201ENST00000260595 MAP2K1Q02750 393 aaPredicted RBP21.55■■□□□ 1.04
CGREF1-201ENST00000260595 RSBN1LQ6PCB5 846 aaPredicted RBP21.55■■□□□ 1.04
CGREF1-201ENST00000260595 PODNQ7Z5L7 613 aa21.55■■□□□ 1.04
CGREF1-201ENST00000260595 HHIPL1Q96JK4 782 aa21.55■■□□□ 1.04
CGREF1-201ENST00000260595 GMLQ99445 158 aa21.55■■□□□ 1.04
CGREF1-201ENST00000260595 MED23Q9ULK4 1368 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 F6X3S4 739 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 ITGA6P23229 1130 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
CGREF1-201ENST00000260595 ZNF280AP59817 542 aaPredicted RBP21.54■■□□□ 1.04
CGREF1-201ENST00000260595 KIF4BQ2VIQ3 1234 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 BEND3Q5T5X7 828 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 PAXIP1Q6ZW49 1069 aaPredicted RBP21.54■■□□□ 1.04
CGREF1-201ENST00000260595 AGBL3Q8NEM8 1001 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 ZNF408Q9H9D4 720 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 THSD7BQ9C0I4 1608 aa21.54■■□□□ 1.04
CGREF1-201ENST00000260595 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
CGREF1-201ENST00000260595 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
CGREF1-201ENST00000260595 KRT26Q7Z3Y9 468 aa21.53■■□□□ 1.04
CGREF1-201ENST00000260595 ZNF521Q96K83 1311 aa21.53■■□□□ 1.04
CGREF1-201ENST00000260595 HSPA8P11142 646 aaKnown RBP21.52■■□□□ 1.04
CGREF1-201ENST00000260595 LBX1P52954 281 aa21.52■■□□□ 1.04
CGREF1-201ENST00000260595 GRM1Q13255 1194 aa21.52■■□□□ 1.04
CGREF1-201ENST00000260595 MYH3P11055 1940 aa21.52■■□□□ 1.04
CGREF1-201ENST00000260595 ASTN2O75129 1339 aaPredicted RBP21.52■■□□□ 1.03
CGREF1-201ENST00000260595 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 ADM5C9JUS6 153 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 AOC2O75106 756 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 MAP2K2P36507 400 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 FOXO4P98177 505 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
CGREF1-201ENST00000260595 TXNRD3Q86VQ6 643 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms