RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 TBC1D16Q8TBP0 767 aa16.52■□□□□ 0.24
CSHL1-201ENST00000259003 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
CSHL1-201ENST00000259003 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-201ENST00000259003 PHAXQ9H814 394 aaKnown RBP16.52■□□□□ 0.24
CSHL1-201ENST00000259003 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
CSHL1-201ENST00000259003 MLLT1Q03111 559 aaPredicted RBP16.51■□□□□ 0.23
CSHL1-201ENST00000259003 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
CSHL1-201ENST00000259003 DGKZQ13574 1117 aa16.51■□□□□ 0.23
CSHL1-201ENST00000259003 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CSHL1-201ENST00000259003 DPF2Q92785 391 aa16.51■□□□□ 0.23
CSHL1-201ENST00000259003 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
CSHL1-201ENST00000259003 ADAMTS8Q9UP79 889 aa16.51■□□□□ 0.23
CSHL1-201ENST00000259003 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
CSHL1-201ENST00000259003 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
CSHL1-201ENST00000259003 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
CSHL1-201ENST00000259003 GBA2Q9HCG7 927 aaPredicted RBP16.5■□□□□ 0.23
CSHL1-201ENST00000259003 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
CSHL1-201ENST00000259003 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
CSHL1-201ENST00000259003 SLC34A2O95436 690 aa16.49■□□□□ 0.23
CSHL1-201ENST00000259003 KIF23Q02241 960 aaPredicted RBP16.49■□□□□ 0.23
CSHL1-201ENST00000259003 RGMBQ6NW40 437 aa16.49■□□□□ 0.23
CSHL1-201ENST00000259003 NOGQ13253 232 aa16.48■□□□□ 0.23
CSHL1-201ENST00000259003 KIF4BQ2VIQ3 1234 aa16.48■□□□□ 0.23
CSHL1-201ENST00000259003 MYD88Q99836 296 aa16.48■□□□□ 0.23
CSHL1-201ENST00000259003 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
CSHL1-201ENST00000259003 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
CSHL1-201ENST00000259003 CA12O43570 354 aa16.47■□□□□ 0.23
CSHL1-201ENST00000259003 UFL1O94874 794 aa16.47■□□□□ 0.23
CSHL1-201ENST00000259003 VIL1P09327 827 aaKnown RBP16.47■□□□□ 0.23
CSHL1-201ENST00000259003 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
CSHL1-201ENST00000259003 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
CSHL1-201ENST00000259003 ZNF853P0CG23 659 aa16.46■□□□□ 0.23
CSHL1-201ENST00000259003 ZNF157P51786 506 aaPredicted RBP16.46■□□□□ 0.23
CSHL1-201ENST00000259003 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
CSHL1-201ENST00000259003 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
CSHL1-201ENST00000259003 ZBTB38Q8NAP3 1195 aaPredicted RBP16.46■□□□□ 0.23
CSHL1-201ENST00000259003 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
CSHL1-201ENST00000259003 CDCA5Q96FF9 252 aa16.46■□□□□ 0.23
CSHL1-201ENST00000259003 TRPA1O75762 1119 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 HOXB7P09629 217 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 RPS12P25398 132 aaKnown RBP16.45■□□□□ 0.22
CSHL1-201ENST00000259003 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 C2orf69Q8N8R5 385 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 EYA3Q99504 573 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 RNF186Q9NXI6 227 aa16.45■□□□□ 0.22
CSHL1-201ENST00000259003 SLC10A3P09131 477 aa16.44■□□□□ 0.22
CSHL1-201ENST00000259003 SCARF1Q14162 830 aa16.44■□□□□ 0.22
CSHL1-201ENST00000259003 ANGEL2Q5VTE6 544 aaKnown RBP16.44■□□□□ 0.22
CSHL1-201ENST00000259003 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
CSHL1-201ENST00000259003 CSRNP1Q96S65 589 aa16.44■□□□□ 0.22
CSHL1-201ENST00000259003 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
CSHL1-201ENST00000259003 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
CSHL1-201ENST00000259003 APAF1O14727 1248 aa16.43■□□□□ 0.22
CSHL1-201ENST00000259003 WDR43Q15061 677 aaKnown RBP eCLIP16.43■□□□□ 0.22
CSHL1-201ENST00000259003 GMLQ99445 158 aa16.43■□□□□ 0.22
CSHL1-201ENST00000259003 ANKIB1Q9P2G1 1089 aa16.43■□□□□ 0.22
CSHL1-201ENST00000259003 GGA1Q9UJY5 639 aa16.43■□□□□ 0.22
CSHL1-201ENST00000259003 PAPPA2Q9BXP8 1791 aa16.42■□□□□ 0.22
CSHL1-201ENST00000259003 SOX10P56693 466 aa16.42■□□□□ 0.22
CSHL1-201ENST00000259003 ZNF280AP59817 542 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-201ENST00000259003 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
CSHL1-201ENST00000259003 RASAL3Q86YV0 1011 aa16.42■□□□□ 0.22
CSHL1-201ENST00000259003 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
CSHL1-201ENST00000259003 PCCAP05165 728 aaPredicted RBP16.41■□□□□ 0.22
CSHL1-201ENST00000259003 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
CSHL1-201ENST00000259003 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
CSHL1-201ENST00000259003 G3V3G9 751 aa16.4■□□□□ 0.22
CSHL1-201ENST00000259003 PDE8AO60658 829 aa16.4■□□□□ 0.22
CSHL1-201ENST00000259003 DCAF8Q5TAQ9 597 aa16.4■□□□□ 0.22
CSHL1-201ENST00000259003 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
CSHL1-201ENST00000259003 A0A1B0GUL6 1792 aa16.4■□□□□ 0.22
CSHL1-201ENST00000259003 UBE2Q2LH0YL09 131 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 IGKV5-2P06315 115 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 NBPF9Q3BBW0 867 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 TXNRD3Q86VQ6 643 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
CSHL1-201ENST00000259003 MYOZ2Q9NPC6 264 aa16.39■□□□□ 0.21
CSHL1-201ENST00000259003 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
CSHL1-201ENST00000259003 KLRK1P26718 216 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 MAP3K2Q9Y2U5 619 aa16.38■□□□□ 0.21
CSHL1-201ENST00000259003 ZNF609O15014 1411 aa16.37■□□□□ 0.21
CSHL1-201ENST00000259003 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
CSHL1-201ENST00000259003 G2E3Q7L622 706 aa16.37■□□□□ 0.21
CSHL1-201ENST00000259003 XDHP47989 1333 aa16.37■□□□□ 0.21
CSHL1-201ENST00000259003 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 ATP2B4P23634 1241 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 CTSWP56202 376 aa16.36■□□□□ 0.21
CSHL1-201ENST00000259003 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
CSHL1-201ENST00000259003 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
CSHL1-201ENST00000259003 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms