RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 Q6ZUG5 572 aa23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 ASAP1Q9ULH1 1129 aa23.21■■□□□ 1.31
CDC42EP1-201ENST00000249014 PDIA4P13667 645 aaKnown RBP23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 GTF3C6Q969F1 213 aa23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 NAP1L5Q96NT1 182 aaPredicted RBP23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 HELLSQ9NRZ9 838 aa23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 NOL7Q9UMY1 257 aaKnown RBP23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 MSNP26038 577 aaKnown RBP23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 ZMYM1Q5SVZ6 1142 aa23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 TTC6Q86TZ1 520 aa23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 DNAJC10Q8IXB1 793 aa23.2■■□□□ 1.3
CDC42EP1-201ENST00000249014 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
CDC42EP1-201ENST00000249014 JAK2O60674 1132 aa23.19■■□□□ 1.3
CDC42EP1-201ENST00000249014 LETM1O95202 739 aaPredicted RBP23.19■■□□□ 1.3
CDC42EP1-201ENST00000249014 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
CDC42EP1-201ENST00000249014 PIGBQ92521 554 aa23.19■■□□□ 1.3
CDC42EP1-201ENST00000249014 LRRC2Q9BYS8 371 aa23.18■■□□□ 1.3
CDC42EP1-201ENST00000249014 ITGB4P16144 1822 aa23.18■■□□□ 1.3
CDC42EP1-201ENST00000249014 SPEF2Q9C093 1822 aa23.18■■□□□ 1.3
CDC42EP1-201ENST00000249014 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
CDC42EP1-201ENST00000249014 KRT85P78386 507 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 FAM89AQ96GI7 184 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 DSCC1Q9BVC3 393 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 MAST3O60307 1309 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 GIMAP6Q6P9H5 292 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 FAM184AQ8NB25 1140 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 BRF1Q92994 677 aa23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 CCDC85AQ96PX6 553 aaPredicted RBP23.17■■□□□ 1.3
CDC42EP1-201ENST00000249014 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 FUCA2Q9BTY2 467 aa23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 CEP126Q9P2H0 1117 aa23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 HSPD1P10809 573 aaKnown RBP23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 HSP90B1P14625 803 aaKnown RBP23.16■■□□□ 1.3
CDC42EP1-201ENST00000249014 RNF113AO15541 343 aaKnown RBP23.15■■□□□ 1.3
CDC42EP1-201ENST00000249014 ADORA1P30542 326 aa23.15■■□□□ 1.3
CDC42EP1-201ENST00000249014 TICAM2Q86XR7 235 aa23.15■■□□□ 1.3
CDC42EP1-201ENST00000249014 ELP1O95163 1332 aa23.14■■□□□ 1.3
CDC42EP1-201ENST00000249014 PCCAP05165 728 aaPredicted RBP23.14■■□□□ 1.3
CDC42EP1-201ENST00000249014 SCRN1Q12765 414 aa23.14■■□□□ 1.3
CDC42EP1-201ENST00000249014 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.3
CDC42EP1-201ENST00000249014 VSIG10Q8N0Z9 540 aa23.14■■□□□ 1.3
CDC42EP1-201ENST00000249014 M0R2C6 588 aa23.14■■□□□ 1.29
CDC42EP1-201ENST00000249014 UVSSAQ2YD98 709 aa23.14■■□□□ 1.29
CDC42EP1-201ENST00000249014 DHX32Q7L7V1 743 aaKnown RBP23.14■■□□□ 1.29
CDC42EP1-201ENST00000249014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDC42EP1-201ENST00000249014 TEX13AQ9BXU3 409 aaPredicted RBP23.14■■□□□ 1.29
CDC42EP1-201ENST00000249014 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.297e-7■■■■□ 21.2
CDC42EP1-201ENST00000249014 SYNE4Q8N205 404 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 XAGE2Q96GT9 111 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 PLA2G12BQ9BX93 195 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 BTG4Q9NY30 223 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 ZKSCAN5Q9Y2L8 839 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 CSF1RP07333 972 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 ZBTB38Q8NAP3 1195 aaPredicted RBP23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 TFIP11Q9UBB9 837 aaKnown RBP23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 CCDC39Q9UFE4 941 aa23.13■■□□□ 1.29
CDC42EP1-201ENST00000249014 OSBP2Q969R2 916 aa23.12■■□□□ 1.29
CDC42EP1-201ENST00000249014 FGD1P98174 961 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 HLFQ16534 295 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 DDX11Q96FC9 970 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 USP25Q9UHP3 1055 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 FBXO3Q9UK99 471 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 MAP3K15Q6ZN16 1313 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 E7EWF7 191 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 STARD3NLO95772 234 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 SCARF1Q14162 830 aa23.11■■□□□ 1.29
CDC42EP1-201ENST00000249014 ZNF500O60304 480 aaPredicted RBP23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 PFKFB2O60825 505 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 LIG1P18858 919 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 TTC39AQ5SRH9 613 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 GIGYF2Q6Y7W6 1299 aaKnown RBP23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 SMARCC2Q8TAQ2 1214 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 AGXT2Q9BYV1 514 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 AKAP2Q9Y2D5 859 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 NWD2Q9ULI1 1742 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 APOBRQ0VD83 1088 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 IFIT5Q13325 482 aaKnown RBP23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 TTLL5Q6EMB2 1281 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 SLC4A9Q96Q91 983 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 SCAND2PQ9GZW5 306 aaPredicted RBP23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 KAT6BQ8WYB5 2073 aa23.1■■□□□ 1.29
CDC42EP1-201ENST00000249014 GPTP24298 496 aa23.09■■□□□ 1.29
CDC42EP1-201ENST00000249014 RESTQ13127 1097 aa23.09■■□□□ 1.29
CDC42EP1-201ENST00000249014 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
CDC42EP1-201ENST00000249014 LEO1Q8WVC0 666 aaPredicted RBP23.09■■□□□ 1.29
CDC42EP1-201ENST00000249014 SPATA32Q96LK8 384 aa23.09■■□□□ 1.29
CDC42EP1-201ENST00000249014 CTDNEP1O95476 244 aa23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 TAF7LQ5H9L4 462 aa23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 KLHL34Q8N239 644 aa23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 FOXP2O15409 715 aa23.08■■□□□ 1.29
CDC42EP1-201ENST00000249014 OFD1O75665 1012 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms