RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IL15P40933 162 aaPredicted RBP25.63■■□□□ 1.69
SH2D3A-201ENST00000245908 HELLSQ9NRZ9 838 aa25.62■■□□□ 1.69
SH2D3A-201ENST00000245908 PAG1Q9NWQ8 432 aa25.62■■□□□ 1.69
SH2D3A-201ENST00000245908 SPEF2Q9C093 1822 aa25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 CCDC191Q8NCU4 936 aa25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 R3HCC1Q9Y3T6 440 aaKnown RBP25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 CCDC192P0DO97 292 aa25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 KIAA2012Q0VF49 1180 aa25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 NKX1-1Q15270 411 aaPredicted RBP25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 NEUROD6Q96NK8 337 aa25.61■■□□□ 1.69
SH2D3A-201ENST00000245908 JAK2O60674 1132 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 DSCC1Q9BVC3 393 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 GOLIM4O00461 696 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 A1BGP04217 495 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 HMGB1P09429 215 aaKnown RBP25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 LIG1P18858 919 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 STOX1Q6ZVD7 989 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 SPATA32Q96LK8 384 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 NUP62CLQ9H1M0 184 aa25.6■■□□□ 1.69
SH2D3A-201ENST00000245908 SHANK3Q9BYB0 1731 aa25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 XIRP1Q702N8 1843 aaKnown RBP25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 EYA2O00167 538 aa25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 LEO1Q8WVC0 666 aaPredicted RBP25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 ATG3Q9NT62 314 aa25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 TNS2Q63HR2 1409 aa25.59■■□□□ 1.69
SH2D3A-201ENST00000245908 HSP90B1P14625 803 aaKnown RBP25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 MAP3K11Q16584 847 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 ZMYM1Q5SVZ6 1142 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 COL5A2P05997 1499 aaPredicted RBP25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 CIAO1O76071 339 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 TIMM10P62072 90 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 RESTQ13127 1097 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 TOM1L2Q6ZVM7 507 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 BRF1Q92994 677 aa25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 CCDC9Q9Y3X0 531 aaKnown RBP25.58■■□□□ 1.69
SH2D3A-201ENST00000245908 SMARCC2Q8TAQ2 1214 aa25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 LLPHQ9BRT6 129 aaKnown RBP25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 PRDM11Q9NQV5 511 aa25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 DHX32Q7L7V1 743 aaKnown RBP25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 ZBTB3Q9H5J0 574 aa25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 TFIP11Q9UBB9 837 aaKnown RBP25.57■■□□□ 1.68
SH2D3A-201ENST00000245908 PFKFB2O60825 505 aa25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 LRRC24Q50LG9 513 aa25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 PRDM4Q9UKN5 801 aa25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 SCRN1Q12765 414 aa25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 BRINP3Q76B58 766 aa25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 DDX19AQ9NUU7 478 aaKnown RBP25.56■■□□□ 1.68
SH2D3A-201ENST00000245908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.55■■□□□ 1.68
SH2D3A-201ENST00000245908 GOLGA6L4A6NEF3 574 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 AGXT2Q9BYV1 514 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 ZSCAN16Q9H4T2 348 aaPredicted RBP25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 MYH15Q9Y2K3 1946 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 AP5Z1O43299 807 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 IFIT1P09914 478 aaKnown RBP25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 ZNF594Q96JF6 807 aaPredicted RBP25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 LRRC2Q9BYS8 371 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 DACT1Q9NYF0 836 aa25.54■■□□□ 1.68
SH2D3A-201ENST00000245908 A0A1B0GUL7 405 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 EXOSC10Q01780 885 aaKnown RBP25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 SLFNL1Q499Z3 407 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 RBM43Q6ZSC3 357 aaKnown RBP25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 FAM200AQ8TCP9 573 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 PIBF1Q8WXW3 757 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 RNF113AO15541 343 aaKnown RBP25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 IL2RBP14784 551 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 FGD1P98174 961 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 TYRO3Q06418 890 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 MTERF4Q7Z6M4 381 aaKnown RBP25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 ISCA1Q9BUE6 129 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 MRVI1Q9Y6F6 885 aa25.53■■□□□ 1.68
SH2D3A-201ENST00000245908 MAST3O60307 1309 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 H3BQV1 296 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 HSPD1P10809 573 aaKnown RBP25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 TNMDQ9H2S6 317 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 CLSTN2Q9H4D0 955 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 CAMK4Q16566 473 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 NSUN7Q8NE18 718 aaKnown RBP25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 DDX11Q96FC9 970 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 PGBD1Q96JS3 809 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 ZNF830Q96NB3 372 aaPredicted RBP25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 CARD10Q9BWT7 1032 aa25.52■■□□□ 1.68
SH2D3A-201ENST00000245908 ABCA3Q99758 1704 aa25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 MPNDQ8N594 471 aa25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 RBM10P98175 930 aaKnown RBP25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 SASS6Q6UVJ0 657 aa25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 PUS3Q9BZE2 481 aaKnown RBP25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 TTC12Q9H892 705 aaPredicted RBP25.51■■□□□ 1.67
SH2D3A-201ENST00000245908 TOGARAM1Q9Y4F4 1720 aa25.5■■□□□ 1.67
SH2D3A-201ENST00000245908 E7EWF7 191 aa25.5■■□□□ 1.67
SH2D3A-201ENST00000245908 NAA16Q6N069 864 aaPredicted RBP25.5■■□□□ 1.67
SH2D3A-201ENST00000245908 HMGN5P82970 282 aaKnown RBP25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 FBXO3Q9UK99 471 aa25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 CFAP45Q9UL16 551 aa25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 PLCB2Q00722 1185 aa25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 APOBRQ0VD83 1088 aa25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 CEP126Q9P2H0 1117 aa25.49■■□□□ 1.67
SH2D3A-201ENST00000245908 CTDNEP1O95476 244 aa25.48■■□□□ 1.67
SH2D3A-201ENST00000245908 SOS2Q07890 1332 aaPredicted RBP25.48■■□□□ 1.67
SH2D3A-201ENST00000245908 UQCRHLA0A096LP55 91 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms