RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 PANK1Q8TE04 598 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 PHAXQ9H814 394 aaKnown RBP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 LAMB2P55268 1798 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 PRAMEF22A3QJZ6 481 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 PI4KAP2A4QPH2 592 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 SUPT20HQ8NEM7 779 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 RWDD1Q9H446 243 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-201ENST00000238682 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 TCIRG1Q13488 830 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 PROSER3Q2NL68 480 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 CENPQQ7L2Z9 268 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-201ENST00000238682 ZNF34Q8IZ26 560 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
TGFB3-201ENST00000238682 L3MBTL3Q96JM7 780 aaPredicted RBP11.54□□□□□ -0.56
TGFB3-201ENST00000238682 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
TGFB3-201ENST00000238682 NCLP19338 710 aaKnown RBP11.53□□□□□ -0.56
TGFB3-201ENST00000238682 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 NFKBIEO00221 500 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 HMMRO75330 724 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 GNAI2P04899 355 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 PRPF40BQ6NWY9 871 aaKnown RBP11.53□□□□□ -0.56
TGFB3-201ENST00000238682 C7orf43Q8WVR3 580 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
TGFB3-201ENST00000238682 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
TGFB3-201ENST00000238682 NUP98P52948 1817 aa11.53□□□□□ -0.56
TGFB3-201ENST00000238682 MYL6BP14649 208 aa11.52□□□□□ -0.56
TGFB3-201ENST00000238682 MTX1Q13505 466 aa11.52□□□□□ -0.56
TGFB3-201ENST00000238682 SCN4AP35499 1836 aa11.52□□□□□ -0.57
TGFB3-201ENST00000238682 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
TGFB3-201ENST00000238682 NEURL1BA8MQ27 555 aa11.51□□□□□ -0.57
TGFB3-201ENST00000238682 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
TGFB3-201ENST00000238682 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
TGFB3-201ENST00000238682 CWC25Q9NXE8 425 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
TGFB3-201ENST00000238682 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 UBTFL1P0CB47 393 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 RPGRQ92834 1020 aaKnown RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
TGFB3-201ENST00000238682 GRM8O00222 908 aa11.5□□□□□ -0.57
TGFB3-201ENST00000238682 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
TGFB3-201ENST00000238682 GCKRQ14397 625 aa11.5□□□□□ -0.57
TGFB3-201ENST00000238682 ANKRD44Q8N8A2 993 aa11.5□□□□□ -0.57
TGFB3-201ENST00000238682 H7C1W4 665 aa11.5□□□□□ -0.57
TGFB3-201ENST00000238682 PCCAP05165 728 aaPredicted RBP11.5□□□□□ -0.57
TGFB3-201ENST00000238682 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
TGFB3-201ENST00000238682 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
TGFB3-201ENST00000238682 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
TGFB3-201ENST00000238682 NTSR2O95665 410 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 RASSF7Q02833 373 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
TGFB3-201ENST00000238682 ERFEQ4G0M1 354 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 HSP90AB4PQ58FF6 505 aa11.49□□□□□ -0.57
TGFB3-201ENST00000238682 LRRC37AA6NMS7 1700 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 C21orf2O43822 256 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 BBOX1O75936 387 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 IGKV5-2P06315 115 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 JMYQ8N9B5 988 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 ZBTB38Q8NAP3 1195 aaPredicted RBP11.48□□□□□ -0.57
TGFB3-201ENST00000238682 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 MYD88Q99836 296 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 C9orf78Q9NZ63 289 aaPredicted RBP11.48□□□□□ -0.57
TGFB3-201ENST00000238682 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 F6X3S4 739 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 ATP8B2P98198 1209 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 AIMP1Q12904 312 aaKnown RBP11.48□□□□□ -0.57
TGFB3-201ENST00000238682 TTLL7Q6ZT98 887 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
TGFB3-201ENST00000238682 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
TGFB3-201ENST00000238682 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
TGFB3-201ENST00000238682 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
TGFB3-201ENST00000238682 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
TGFB3-201ENST00000238682 ZNF609O15014 1411 aa11.47□□□□□ -0.57
TGFB3-201ENST00000238682 DDX60Q8IY21 1712 aaKnown RBP11.47□□□□□ -0.57
TGFB3-201ENST00000238682 CARNS1A5YM72 827 aa11.47□□□□□ -0.57
TGFB3-201ENST00000238682 ANXA1P04083 346 aa11.47□□□□□ -0.57
TGFB3-201ENST00000238682 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
TGFB3-201ENST00000238682 TNNQ9UQP3 1299 aa11.47□□□□□ -0.57
TGFB3-201ENST00000238682 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
TGFB3-201ENST00000238682 CASP7P55210 303 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 HLFQ16534 295 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 CEP85Q6P2H3 762 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 SMC5Q8IY18 1101 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.57
TGFB3-201ENST00000238682 SLX4Q8IY92 1834 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 FZD9O00144 591 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 RAB11FIP3O75154 756 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 NLRP10Q86W26 655 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms