RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
NDUFB3-201ENST00000237889 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
NDUFB3-201ENST00000237889 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
NDUFB3-201ENST00000237889 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
NDUFB3-201ENST00000237889 MANSC4A6NHS7 340 aaPredicted RBP12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 ANKRD13DQ6ZTN6 518 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 DPF3Q92784 378 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 ZC3H12CQ9C0D7 883 aaKnown RBP12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 UBN2Q6ZU65 1347 aa12.85□□□□□ -0.35
NDUFB3-201ENST00000237889 ECE2O60344 883 aa12.84□□□□□ -0.35
NDUFB3-201ENST00000237889 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
NDUFB3-201ENST00000237889 SLC51AQ86UW1 340 aa12.84□□□□□ -0.35
NDUFB3-201ENST00000237889 AGBL3Q8NEM8 1001 aa12.84□□□□□ -0.35
NDUFB3-201ENST00000237889 RBM27Q9P2N5 1060 aaKnown RBP12.84□□□□□ -0.35
NDUFB3-201ENST00000237889 CUL9Q8IWT3 2517 aa12.83□□□□□ -0.36
NDUFB3-201ENST00000237889 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
NDUFB3-201ENST00000237889 SLC9C1Q4G0N8 1177 aa12.83□□□□□ -0.36
NDUFB3-201ENST00000237889 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
NDUFB3-201ENST00000237889 R3HDMLQ9H3Y0 253 aa12.83□□□□□ -0.36
NDUFB3-201ENST00000237889 USP17L8P0C7I0 530 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 MYL6BP14649 208 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 TTLL7Q6ZT98 887 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 NR2E3Q9Y5X4 410 aa12.82□□□□□ -0.36
NDUFB3-201ENST00000237889 SP3Q02447 781 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 SPRYD7Q5W111 196 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 PNISRQ8TF01 805 aaKnown RBP12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 ZNF333Q96JL9 665 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
NDUFB3-201ENST00000237889 A0A1W2PPC1 479 aa12.8□□□□□ -0.36
NDUFB3-201ENST00000237889 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
NDUFB3-201ENST00000237889 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
NDUFB3-201ENST00000237889 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
NDUFB3-201ENST00000237889 HTATIP2Q9BUP3 242 aa12.8□□□□□ -0.36
NDUFB3-201ENST00000237889 HCLS1P14317 486 aaPredicted RBP12.79□□□□□ -0.36
NDUFB3-201ENST00000237889 PTPN12Q05209 780 aaKnown RBP12.79□□□□□ -0.36
NDUFB3-201ENST00000237889 MCM10Q7L590 875 aa12.79□□□□□ -0.36
NDUFB3-201ENST00000237889 KCNQ5Q9NR82 932 aa12.79□□□□□ -0.36
NDUFB3-201ENST00000237889 TRMT112Q9UI30 125 aaKnown RBP12.79□□□□□ -0.36
NDUFB3-201ENST00000237889 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 POLLQ9UGP5 575 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 SZT2Q5T011 3432 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 RTL9Q8NET4 1388 aa12.78□□□□□ -0.36
NDUFB3-201ENST00000237889 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.36
NDUFB3-201ENST00000237889 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 WDHD1O75717 1129 aaPredicted RBP12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 PRKAR2BP31323 418 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 MMP14P50281 582 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
NDUFB3-201ENST00000237889 KIAA0100Q14667 2235 aaKnown RBP12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 UNCXA6NJT0 531 aa12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 PRKG1Q13976 671 aa12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 LDLRAD1Q5T700 205 aa12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
NDUFB3-201ENST00000237889 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
NDUFB3-201ENST00000237889 GPSM2P81274 684 aa12.75□□□□□ -0.37
NDUFB3-201ENST00000237889 CRHR2Q13324 411 aa12.75□□□□□ -0.37
NDUFB3-201ENST00000237889 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
NDUFB3-201ENST00000237889 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
NDUFB3-201ENST00000237889 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 MYCP01106 439 aaPredicted RBP12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 NEFMP07197 916 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 KIF22Q14807 665 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 MIS18AQ9NYP9 233 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
NDUFB3-201ENST00000237889 UFL1O94874 794 aa12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 NLRP10Q86W26 655 aa12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 GGA1Q9UJY5 639 aa12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
NDUFB3-201ENST00000237889 CEP290O15078 2479 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 374.9 ms