RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
VEGFA-201ENST00000230480 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
VEGFA-201ENST00000230480 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
VEGFA-201ENST00000230480 CXCL9Q07325 125 aa17.35■□□□□ 0.37
VEGFA-201ENST00000230480 ATF7IPQ6VMQ6 1270 aa17.35■□□□□ 0.37
VEGFA-201ENST00000230480 LARGE2Q8N3Y3 721 aa17.35■□□□□ 0.37
VEGFA-201ENST00000230480 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-201ENST00000230480 MEIS3Q99687 375 aa17.35■□□□□ 0.37
VEGFA-201ENST00000230480 KLRK1P26718 216 aa17.34■□□□□ 0.37
VEGFA-201ENST00000230480 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
VEGFA-201ENST00000230480 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
VEGFA-201ENST00000230480 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
VEGFA-201ENST00000230480 PSME4Q14997 1843 aa17.33■□□□□ 0.37
VEGFA-201ENST00000230480 POTEIP0CG38 1075 aa17.33■□□□□ 0.36
VEGFA-201ENST00000230480 POTEJP0CG39 1038 aa17.33■□□□□ 0.36
VEGFA-201ENST00000230480 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-201ENST00000230480 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
VEGFA-201ENST00000230480 SCN4AP35499 1836 aa17.33■□□□□ 0.36
VEGFA-201ENST00000230480 KDM2BQ8NHM5 1336 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 RIMBP2O15034 1052 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 CHRNDQ07001 517 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 TMEM57Q8N5G2 664 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 ZNRF3Q9ULT6 936 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 RIPOR2Q9Y4F9 1068 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 ADAMTSL1Q8N6G6 1762 aa17.32■□□□□ 0.36
VEGFA-201ENST00000230480 XDHP47989 1333 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 SCNN1DP51172 638 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 IFIT5Q13325 482 aaKnown RBP17.31■□□□□ 0.36
VEGFA-201ENST00000230480 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
VEGFA-201ENST00000230480 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-201ENST00000230480 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 C6orf229H3BNL8 230 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 TAF5LO75529 589 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 UFL1O94874 794 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 GPC2Q8N158 579 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
VEGFA-201ENST00000230480 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
VEGFA-201ENST00000230480 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-201ENST00000230480 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
VEGFA-201ENST00000230480 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
VEGFA-201ENST00000230480 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
VEGFA-201ENST00000230480 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
VEGFA-201ENST00000230480 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
VEGFA-201ENST00000230480 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
VEGFA-201ENST00000230480 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
VEGFA-201ENST00000230480 RAD17O75943 681 aa17.28■□□□□ 0.36
VEGFA-201ENST00000230480 EPS15P42566 896 aa17.28■□□□□ 0.36
VEGFA-201ENST00000230480 VGLL2Q8N8G2 317 aa17.28■□□□□ 0.36
VEGFA-201ENST00000230480 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
VEGFA-201ENST00000230480 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
VEGFA-201ENST00000230480 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-201ENST00000230480 PLIN1O60240 522 aa17.27■□□□□ 0.36
VEGFA-201ENST00000230480 TOMM70O94826 608 aa17.27■□□□□ 0.36
VEGFA-201ENST00000230480 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
VEGFA-201ENST00000230480 ATG9AQ7Z3C6 839 aa17.27■□□□□ 0.36
VEGFA-201ENST00000230480 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
VEGFA-201ENST00000230480 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-201ENST00000230480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-201ENST00000230480 ZNF804BA4D1E1 1349 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 PSMD14O00487 310 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 ECE2O60344 883 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-201ENST00000230480 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
VEGFA-201ENST00000230480 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 GJA3Q9Y6H8 435 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 MED23Q9ULK4 1368 aa17.26■□□□□ 0.35
VEGFA-201ENST00000230480 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 MTX1Q13505 466 aa17.25■□□□□ 0.35
VEGFA-201ENST00000230480 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
VEGFA-201ENST00000230480 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 GMLQ99445 158 aa17.25■□□□□ 0.35
VEGFA-201ENST00000230480 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
VEGFA-201ENST00000230480 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 POLR2AP24928 1970 aaKnown RBP17.25■□□□□ 0.35
VEGFA-201ENST00000230480 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
VEGFA-201ENST00000230480 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-201ENST00000230480 HIRAP54198 1017 aaPredicted RBP17.24■□□□□ 0.35
VEGFA-201ENST00000230480 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
VEGFA-201ENST00000230480 EYA3Q99504 573 aa17.24■□□□□ 0.35
VEGFA-201ENST00000230480 ANKRD2Q9GZV1 360 aa17.24■□□□□ 0.35
VEGFA-201ENST00000230480 GPRC5DQ9NZD1 345 aa17.24■□□□□ 0.35
VEGFA-201ENST00000230480 PA2G4Q9UQ80 394 aaKnown RBP17.24■□□□□ 0.35
VEGFA-201ENST00000230480 EGFRP00533 1210 aa17.23■□□□□ 0.35
VEGFA-201ENST00000230480 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
VEGFA-201ENST00000230480 PNMA6EA0A0J9YXQ4 647 aa17.22■□□□□ 0.35
VEGFA-201ENST00000230480 FGFR2P21802 821 aa17.22■□□□□ 0.35
VEGFA-201ENST00000230480 EPHX2P34913 555 aa17.22■□□□□ 0.35
VEGFA-201ENST00000230480 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms