RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 PCNTO95613 3336 aa13.03□□□□□ -0.32
CDCA3-201ENST00000229265 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
CDCA3-201ENST00000229265 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
CDCA3-201ENST00000229265 SDSP20132 328 aa13.03□□□□□ -0.32
CDCA3-201ENST00000229265 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
CDCA3-201ENST00000229265 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-201ENST00000229265 ZNF541Q9H0D2 1346 aa13.03□□□□□ -0.32
CDCA3-201ENST00000229265 WDR90Q96KV7 1748 aa13.02□□□□□ -0.32
CDCA3-201ENST00000229265 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 ERC2O15083 957 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 IGKV5-2P06315 115 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
CDCA3-201ENST00000229265 PDE6BP35913 854 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
CDCA3-201ENST00000229265 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDCA3-201ENST00000229265 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 MASTLQ96GX5 879 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 USP26Q9BXU7 913 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 RIC1Q4ADV7 1423 aa13.02□□□□□ -0.33
CDCA3-201ENST00000229265 H7C1W4 665 aa13.01□□□□□ -0.33
CDCA3-201ENST00000229265 LMNB1P20700 586 aa13.01□□□□□ -0.33
CDCA3-201ENST00000229265 ST5P78524 1137 aa13.01□□□□□ -0.33
CDCA3-201ENST00000229265 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-201ENST00000229265 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
CDCA3-201ENST00000229265 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
CDCA3-201ENST00000229265 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
CDCA3-201ENST00000229265 IL17RAQ96F46 866 aa13□□□□□ -0.33
CDCA3-201ENST00000229265 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-201ENST00000229265 SMARCA5O60264 1052 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-201ENST00000229265 NPR1P16066 1061 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 ANAPC15P60006 121 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 HSP90AB3PQ58FF7 597 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-201ENST00000229265 TPTE2Q6XPS3 522 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 KIF6Q6ZMV9 814 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
CDCA3-201ENST00000229265 HIP1O00291 1037 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 RGL2O15211 777 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 RABEP1Q15276 862 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
CDCA3-201ENST00000229265 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 KAZALD1Q96I82 304 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 MYD88Q99836 296 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 ZNF652Q9Y2D9 606 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
CDCA3-201ENST00000229265 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 GLTPD2A6NH11 291 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 HSPA6P17066 643 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-201ENST00000229265 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 RUFY2Q8WXA3 655 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
CDCA3-201ENST00000229265 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-201ENST00000229265 MCCP23508 829 aa12.96□□□□□ -0.33
CDCA3-201ENST00000229265 MCM2P49736 904 aa12.96□□□□□ -0.33
CDCA3-201ENST00000229265 CASP7P55210 303 aa12.96□□□□□ -0.33
CDCA3-201ENST00000229265 FMR1Q06787 632 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDCA3-201ENST00000229265 HSCBQ8IWL3 235 aa12.96□□□□□ -0.33
CDCA3-201ENST00000229265 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-201ENST00000229265 TAOK3Q9H2K8 898 aa12.96□□□□□ -0.33
CDCA3-201ENST00000229265 BICC1Q9H694 974 aaKnown RBP12.96□□□□□ -0.33
CDCA3-201ENST00000229265 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-201ENST00000229265 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 NPHP1O15259 732 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 IFIT2P09913 472 aaKnown RBP12.95□□□□□ -0.34
CDCA3-201ENST00000229265 CHMLP26374 656 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDCA3-201ENST00000229265 OS9Q13438 667 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-201ENST00000229265 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
CDCA3-201ENST00000229265 KIF2CQ99661 725 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
CDCA3-201ENST00000229265 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
CDCA3-201ENST00000229265 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
CDCA3-201ENST00000229265 APBB1O00213 710 aa12.94□□□□□ -0.34
CDCA3-201ENST00000229265 TOMM70O94826 608 aa12.94□□□□□ -0.34
CDCA3-201ENST00000229265 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
CDCA3-201ENST00000229265 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
CDCA3-201ENST00000229265 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
CDCA3-201ENST00000229265 ESYT1Q9BSJ8 1104 aa12.94□□□□□ -0.34
CDCA3-201ENST00000229265 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
CDCA3-201ENST00000229265 CIAO1O76071 339 aa12.93□□□□□ -0.34
CDCA3-201ENST00000229265 CCDC93Q567U6 631 aa12.93□□□□□ -0.34
CDCA3-201ENST00000229265 ANTXR1Q9H6X2 564 aa12.93□□□□□ -0.34
CDCA3-201ENST00000229265 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
CDCA3-201ENST00000229265 CHMP5Q9NZZ3 219 aa12.93□□□□□ -0.34
CDCA3-201ENST00000229265 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms