RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 BRF1Q92994 677 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 DDX19AQ9NUU7 478 aaKnown RBP19.25■□□□□ 0.67
LTBR-201ENST00000228918 SPTLC3Q9NUV7 552 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 PRDM4Q9UKN5 801 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 MYH15Q9Y2K3 1946 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 CAMK4Q16566 473 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 TNMDQ9H2S6 317 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 GOLGA6L4A6NEF3 574 aa19.24■□□□□ 0.67
LTBR-201ENST00000228918 FOXO4P98177 505 aa19.24■□□□□ 0.67
LTBR-201ENST00000228918 CHRNA2Q15822 529 aa19.24■□□□□ 0.67
LTBR-201ENST00000228918 CABLES1Q8TDN4 633 aa19.24■□□□□ 0.67
LTBR-201ENST00000228918 UBR2Q8IWV8 1755 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 H7C1W4 665 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
LTBR-201ENST00000228918 DNTTIP2Q5QJE6 756 aaKnown RBP19.23■□□□□ 0.67
LTBR-201ENST00000228918 STOX1Q6ZVD7 989 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 CLSTN2Q9H4D0 955 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 DCCP43146 1447 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 ATG9AQ7Z3C6 839 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 C17orf53Q8N3J3 647 aaPredicted RBP19.23■□□□□ 0.67
LTBR-201ENST00000228918 FAM13BQ9NYF5 915 aa19.23■□□□□ 0.67
LTBR-201ENST00000228918 TPM3P06753 285 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 ATF3P18847 181 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 SCRN1Q12765 414 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 PGBD1Q96JS3 809 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 KCNF1Q9H3M0 494 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
LTBR-201ENST00000228918 CKAP2LQ8IYA6 745 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 MYRIPQ8NFW9 859 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 GPR108Q9NPR9 543 aa19.22■□□□□ 0.67
LTBR-201ENST00000228918 PRIMPOLQ96LW4 560 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 ZSCAN16Q9H4T2 348 aaPredicted RBP19.21■□□□□ 0.67
LTBR-201ENST00000228918 HELLSQ9NRZ9 838 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 PAG1Q9NWQ8 432 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 H3BQV1 296 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 PFKFB2O60825 505 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 HMGB1P09429 215 aaKnown RBP19.21■□□□□ 0.67
LTBR-201ENST00000228918 IFFO2Q5TF58 517 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 LLPHQ9BRT6 129 aaKnown RBP19.21■□□□□ 0.67
LTBR-201ENST00000228918 LRRC2Q9BYS8 371 aa19.21■□□□□ 0.67
LTBR-201ENST00000228918 SPEF2Q9C093 1822 aa19.21■□□□□ 0.66
LTBR-201ENST00000228918 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 GOLGA6L6A8MZA4 724 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 GOLIM4O00461 696 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 NR1I2O75469 434 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 ANO6Q4KMQ2 910 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 LUZP1Q86V48 1076 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 KIAA1524Q8TCG1 905 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 DSCC1Q9BVC3 393 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
LTBR-201ENST00000228918 STRCP1A6NGW2 1772 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 CPDO75976 1380 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 DHX32Q7L7V1 743 aaKnown RBP19.2■□□□□ 0.66
LTBR-201ENST00000228918 BICD2Q8TD16 824 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 CBX8Q9HC52 389 aa19.2■□□□□ 0.66
LTBR-201ENST00000228918 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
LTBR-201ENST00000228918 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
LTBR-201ENST00000228918 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
LTBR-201ENST00000228918 TTLL7Q6ZT98 887 aa19.19■□□□□ 0.66
LTBR-201ENST00000228918 SPC24Q8NBT2 197 aa19.19■□□□□ 0.66
LTBR-201ENST00000228918 NSUN7Q8NE18 718 aaKnown RBP19.19■□□□□ 0.66
LTBR-201ENST00000228918 NEUROD6Q96NK8 337 aa19.19■□□□□ 0.66
LTBR-201ENST00000228918 IL15P40933 162 aaPredicted RBP19.18■□□□□ 0.66
LTBR-201ENST00000228918 FGD1P98174 961 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 PYCARDQ9ULZ3 195 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 KCPQ6ZWJ8 1503 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 HMGN5P82970 282 aaKnown RBP19.18■□□□□ 0.66
LTBR-201ENST00000228918 SLFNL1Q499Z3 407 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
LTBR-201ENST00000228918 EXOSC10Q01780 885 aaKnown RBP19.17■□□□□ 0.66
LTBR-201ENST00000228918 NAA16Q6N069 864 aaPredicted RBP19.17■□□□□ 0.66
LTBR-201ENST00000228918 CTDNEP1O95476 244 aa19.17■□□□□ 0.66
LTBR-201ENST00000228918 TIMM10P62072 90 aa19.17■□□□□ 0.66
LTBR-201ENST00000228918 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
LTBR-201ENST00000228918 EYA2O00167 538 aa19.16■□□□□ 0.66
LTBR-201ENST00000228918 MTERF4Q7Z6M4 381 aaKnown RBP19.16■□□□□ 0.66
LTBR-201ENST00000228918 PTPDC1A2A3K4 754 aa19.16■□□□□ 0.66
LTBR-201ENST00000228918 GTF2F1P35269 517 aaKnown RBP eCLIP19.16■□□□□ 0.66
LTBR-201ENST00000228918 ADD1P35611 737 aaKnown RBP19.16■□□□□ 0.66
LTBR-201ENST00000228918 APOBRQ0VD83 1088 aa19.16■□□□□ 0.66
LTBR-201ENST00000228918 MAST3O60307 1309 aa19.16■□□□□ 0.66
LTBR-201ENST00000228918 SPATA31A3Q5VYP0 1347 aa19.16■□□□□ 0.66
LTBR-201ENST00000228918 HSPD1P10809 573 aaKnown RBP19.15■□□□□ 0.66
LTBR-201ENST00000228918 LRRC24Q50LG9 513 aa19.15■□□□□ 0.66
LTBR-201ENST00000228918 CCDC191Q8NCU4 936 aa19.15■□□□□ 0.66
LTBR-201ENST00000228918 PCDH11XQ9BZA7 1347 aa19.15■□□□□ 0.66
LTBR-201ENST00000228918 PCDH11YQ9BZA8 1340 aa19.15■□□□□ 0.66
LTBR-201ENST00000228918 SALL1Q9NSC2 1324 aa19.15■□□□□ 0.66
LTBR-201ENST00000228918 E7EWF7 191 aa19.14■□□□□ 0.66
LTBR-201ENST00000228918 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.66
LTBR-201ENST00000228918 A0A0G2JLW4 131 aa19.14■□□□□ 0.65
LTBR-201ENST00000228918 CIAO1O76071 339 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms