RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 RUFY3Q7L099 469 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 ZSCAN31Q96LW9 406 aaPredicted RBP21.14■□□□□ 0.98
GCDH-201ENST00000222214 GREM2Q9H772 168 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 ZNF652Q9Y2D9 606 aa21.14■□□□□ 0.98
GCDH-201ENST00000222214 CAMTA2O94983 1202 aa21.14■□□□□ 0.97
GCDH-201ENST00000222214 BAG4O95429 457 aaKnown RBP21.14■□□□□ 0.97
GCDH-201ENST00000222214 AK2P54819 239 aa21.14■□□□□ 0.97
GCDH-201ENST00000222214 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.97
GCDH-201ENST00000222214 PDRG1Q9NUG6 133 aa21.14■□□□□ 0.97
GCDH-201ENST00000222214 U3KPZ7 1027 aaPredicted RBP21.14■□□□□ 0.97
GCDH-201ENST00000222214 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
GCDH-201ENST00000222214 GOLIM4O00461 696 aa21.13■□□□□ 0.97
GCDH-201ENST00000222214 METTL24Q5JXM2 366 aa21.13■□□□□ 0.97
GCDH-201ENST00000222214 TTC39AQ5SRH9 613 aa21.13■□□□□ 0.97
GCDH-201ENST00000222214 ZNF589Q86UQ0 364 aaPredicted RBP21.13■□□□□ 0.97
GCDH-201ENST00000222214 XAGE2Q96GT9 111 aa21.13■□□□□ 0.97
GCDH-201ENST00000222214 RIC1Q4ADV7 1423 aa21.13■□□□□ 0.97
GCDH-201ENST00000222214 SYNE4Q8N205 404 aa21.12■□□□□ 0.97
GCDH-201ENST00000222214 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
GCDH-201ENST00000222214 CNNM1Q9NRU3 951 aa21.12■□□□□ 0.97
GCDH-201ENST00000222214 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.12■□□□□ 0.97
GCDH-201ENST00000222214 LRP5O75197 1615 aa21.12■□□□□ 0.97
GCDH-201ENST00000222214 CLEC4GQ6UXB4 293 aa21.12■□□□□ 0.97
GCDH-201ENST00000222214 CCDC85AQ96PX6 553 aaPredicted RBP21.12■□□□□ 0.97
GCDH-201ENST00000222214 ALDH8A1Q9H2A2 487 aaPredicted RBP21.12■□□□□ 0.97
GCDH-201ENST00000222214 BCORQ6W2J9 1755 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 KCNQ2O43526 872 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 ANKRD1Q15327 319 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 ATP2B3Q16720 1220 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 NOL8Q76FK4 1167 aaKnown RBP21.11■□□□□ 0.97
GCDH-201ENST00000222214 ZNF512BQ96KM6 892 aaPredicted RBP21.11■□□□□ 0.97
GCDH-201ENST00000222214 USP21Q9UK80 565 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 LAMB2P55268 1798 aa21.11■□□□□ 0.97
GCDH-201ENST00000222214 ZFYP08048 801 aaPredicted RBP21.1■□□□□ 0.97
GCDH-201ENST00000222214 ADCK5Q3MIX3 580 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 SUSD4Q5VX71 490 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 NDUFB9Q9Y6M9 179 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 ZMYM1Q5SVZ6 1142 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 MROH5Q6ZUA9 1318 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
GCDH-201ENST00000222214 RNF113AO15541 343 aaKnown RBP21.09■□□□□ 0.97
GCDH-201ENST00000222214 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
GCDH-201ENST00000222214 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
GCDH-201ENST00000222214 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
GCDH-201ENST00000222214 BRD1O95696 1058 aa21.08■□□□□ 0.97
GCDH-201ENST00000222214 VGLL2Q8N8G2 317 aa21.08■□□□□ 0.97
GCDH-201ENST00000222214 PDE8BO95263 885 aa21.08■□□□□ 0.96
GCDH-201ENST00000222214 PKP1Q13835 747 aa21.08■□□□□ 0.96
GCDH-201ENST00000222214 NIP7Q9Y221 180 aaKnown RBP eCLIP21.08■□□□□ 0.96
GCDH-201ENST00000222214 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
GCDH-201ENST00000222214 NHSQ6T4R5 1651 aa21.07■□□□□ 0.96
GCDH-201ENST00000222214 ZDHHC9Q9Y397 364 aa21.07■□□□□ 0.96
GCDH-201ENST00000222214 ADORA1P30542 326 aa21.06■□□□□ 0.96
GCDH-201ENST00000222214 DDX60Q8IY21 1712 aaKnown RBP21.06■□□□□ 0.96
GCDH-201ENST00000222214 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
GCDH-201ENST00000222214 NTSR2O95665 410 aa21.06■□□□□ 0.96
GCDH-201ENST00000222214 PDIA4P13667 645 aaKnown RBP21.06■□□□□ 0.96
GCDH-201ENST00000222214 RPS6KB1P23443 525 aa21.06■□□□□ 0.96
GCDH-201ENST00000222214 FKBP4Q02790 459 aaKnown RBP eCLIP21.06■□□□□ 0.96
GCDH-201ENST00000222214 RC3H1Q5TC82 1133 aaKnown RBP21.06■□□□□ 0.96
GCDH-201ENST00000222214 ARAP2Q8WZ64 1704 aa21.05■□□□□ 0.96
GCDH-201ENST00000222214 PUM3Q15397 648 aaKnown RBP21.05■□□□□ 0.96
GCDH-201ENST00000222214 ISY1Q9ULR0 285 aaKnown RBP21.05■□□□□ 0.96
GCDH-201ENST00000222214 TTF1Q15361 905 aaPredicted RBP21.05■□□□□ 0.96
GCDH-201ENST00000222214 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
GCDH-201ENST00000222214 SEC62Q99442 399 aaKnown RBP21.05■□□□□ 0.96
GCDH-201ENST00000222214 HMGB1P09429 215 aaKnown RBP21.04■□□□□ 0.96
GCDH-201ENST00000222214 UQCRFS1P1P0C7P4 283 aa21.04■□□□□ 0.96
GCDH-201ENST00000222214 CPA1P15085 419 aa21.04■□□□□ 0.96
GCDH-201ENST00000222214 L1TD1Q5T7N2 865 aaKnown RBP21.04■□□□□ 0.96
GCDH-201ENST00000222214 LPIN2Q92539 896 aa21.04■□□□□ 0.96
GCDH-201ENST00000222214 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.04■□□□□ 0.96
GCDH-201ENST00000222214 BTAF1O14981 1849 aa21.04■□□□□ 0.96
GCDH-201ENST00000222214 MCTP1Q6DN14 999 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 ZSCAN25Q6NSZ9 544 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 CCDC129Q6ZRS4 1044 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 MPHOSPH8Q99549 860 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 SMC3Q9UQE7 1217 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
GCDH-201ENST00000222214 KLHL40Q2TBA0 621 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 NEK1Q96PY6 1258 aa21.03■□□□□ 0.96
GCDH-201ENST00000222214 MYH7P12883 1935 aa21.02■□□□□ 0.96
GCDH-201ENST00000222214 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
GCDH-201ENST00000222214 MAST3O60307 1309 aa21.02■□□□□ 0.96
GCDH-201ENST00000222214 FGFR2P21802 821 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 IGHMBP2P38935 993 aaKnown RBP21.01■□□□□ 0.95
GCDH-201ENST00000222214 AKAP11Q9UKA4 1901 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 CYP21A2P08686 494 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 SLC5A1P13866 664 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 ARID4AP29374 1257 aaPredicted RBP21.01■□□□□ 0.95
GCDH-201ENST00000222214 ZAP70P43403 619 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 MEX3CQ5U5Q3 659 aaKnown RBP21.01■□□□□ 0.95
GCDH-201ENST00000222214 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 APPBP2Q92624 585 aa21.01■□□□□ 0.95
GCDH-201ENST00000222214 HSPD1P10809 573 aaKnown RBP21■□□□□ 0.95
GCDH-201ENST00000222214 GJD4Q96KN9 370 aaPredicted RBP21■□□□□ 0.95
GCDH-201ENST00000222214 CTNNA3Q9UI47 895 aa21■□□□□ 0.95
GCDH-201ENST00000222214 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
GCDH-201ENST00000222214 CHGBP05060 677 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms