RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 LIMCH1Q9UPQ0 1083 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 CHMLP26374 656 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 CCDC97Q96F63 343 aaPredicted RBP12.33□□□□□ -0.44
VPS18-201ENST00000220509 RAI14Q9P0K7 980 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 IL2RBP14784 551 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 ANKRD1Q15327 319 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 NGLY1Q96IV0 654 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
VPS18-201ENST00000220509 ARHGAP23Q9P227 1491 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 EXOC5O00471 708 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 KRT85P78386 507 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 BICDL1Q6ZP65 573 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 CCDC112Q8NEF3 446 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 PIBF1Q8WXW3 757 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 PDLIM2Q96JY6 352 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 PAIP2Q9BPZ3 127 aaKnown RBP12.32□□□□□ -0.44
VPS18-201ENST00000220509 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 DRC1Q96MC2 740 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 ZDHHC9Q9Y397 364 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 COL3A1P02461 1466 aaPredicted RBP12.32□□□□□ -0.44
VPS18-201ENST00000220509 IQSEC2Q5JU85 1478 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 CPA1P15085 419 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 PTGS1P23219 599 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
VPS18-201ENST00000220509 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
VPS18-201ENST00000220509 DDX21Q9NR30 783 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS18-201ENST00000220509 TRMT1Q9NXH9 659 aaKnown RBP12.32□□□□□ -0.44
VPS18-201ENST00000220509 C1orf167Q5SNV9 1468 aa12.32□□□□□ -0.44
VPS18-201ENST00000220509 SLIT1O75093 1534 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 A1BGP04217 495 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 NAA30Q147X3 362 aaPredicted RBP12.31□□□□□ -0.44
VPS18-201ENST00000220509 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
VPS18-201ENST00000220509 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 G3V3G9 751 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 TPM4P67936 248 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 DCAF8Q5TAQ9 597 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
VPS18-201ENST00000220509 PHKG2P15735 406 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
VPS18-201ENST00000220509 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 PYCARDQ9ULZ3 195 aa12.31□□□□□ -0.44
VPS18-201ENST00000220509 ERICH2A1L162 156 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 DCAF5Q96JK2 942 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
VPS18-201ENST00000220509 KRT32Q14532 448 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 ICE2Q659A1 982 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 CCDC186Q7Z3E2 898 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
VPS18-201ENST00000220509 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPS18-201ENST00000220509 FEZ2Q9UHY8 353 aaPredicted RBP12.29□□□□□ -0.44
VPS18-201ENST00000220509 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 H0YHG0 523 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 SARNPP82979 210 aaKnown RBP12.29□□□□□ -0.44
VPS18-201ENST00000220509 GUCY1B3Q02153 619 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 GOLGA6L1Q8N7Z2 621 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
VPS18-201ENST00000220509 RBM8AQ9Y5S9 174 aaKnown RBP12.29□□□□□ -0.44
VPS18-201ENST00000220509 CYP27B1O15528 508 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
VPS18-201ENST00000220509 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
VPS18-201ENST00000220509 HAND2P61296 217 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 LRMPQ12912 555 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 SPATA32Q96LK8 384 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 GJB2P29033 226 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 CCT2P78371 535 aaKnown RBP12.28□□□□□ -0.44
VPS18-201ENST00000220509 FAM173BQ6P4H8 233 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 CTR9Q6PD62 1173 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 ME1P48163 572 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 CCDC34Q96HJ3 373 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 DEF6Q9H4E7 631 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 SUFUQ9UMX1 484 aa12.28□□□□□ -0.44
VPS18-201ENST00000220509 ITSN1Q15811 1721 aa12.27□□□□□ -0.44
VPS18-201ENST00000220509 STX6O43752 255 aa12.27□□□□□ -0.44
VPS18-201ENST00000220509 CCDC192P0DO97 292 aa12.27□□□□□ -0.44
VPS18-201ENST00000220509 NMIQ13287 307 aaPredicted RBP12.27□□□□□ -0.44
VPS18-201ENST00000220509 LUZP1Q86V48 1076 aa12.27□□□□□ -0.44
VPS18-201ENST00000220509 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.44
VPS18-201ENST00000220509 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms