RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GOLIM4O00461 696 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 CCDC158Q5M9N0 1113 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 ZDHHC9Q9Y397 364 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 SPATA31A6Q5VVP1 1343 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 PSMA5P28066 241 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 LDHAL6AQ6ZMR3 332 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 RUFY3Q7L099 469 aa35.62■■■■□ 3.29
PABPN1-201ENST00000216727 COL5A3P25940 1745 aaPredicted RBP35.62■■■■□ 3.29
PABPN1-201ENST00000216727 SKOR2Q2VWA4 1001 aaPredicted RBP35.61■■■■□ 3.29
PABPN1-201ENST00000216727 XAGE2Q96GT9 111 aa35.61■■■■□ 3.29
PABPN1-201ENST00000216727 PARP10Q53GL7 1025 aa35.61■■■■□ 3.29
PABPN1-201ENST00000216727 PDRG1Q9NUG6 133 aa35.61■■■■□ 3.29
PABPN1-201ENST00000216727 HELLSQ9NRZ9 838 aa35.6■■■■□ 3.29
PABPN1-201ENST00000216727 ABCC12Q96J65 1359 aa35.58■■■■□ 3.29
PABPN1-201ENST00000216727 METTL24Q5JXM2 366 aa35.58■■■■□ 3.29
PABPN1-201ENST00000216727 SUSD4Q5VX71 490 aa35.58■■■■□ 3.29
PABPN1-201ENST00000216727 CPA1P15085 419 aa35.57■■■■□ 3.29
PABPN1-201ENST00000216727 GORABQ5T7V8 394 aa35.57■■■■□ 3.29
PABPN1-201ENST00000216727 UTP14AQ9BVJ6 771 aaKnown RBP35.57■■■■□ 3.29
PABPN1-201ENST00000216727 TTC39AQ5SRH9 613 aa35.57■■■■□ 3.28
PABPN1-201ENST00000216727 ADORA1P30542 326 aa35.56■■■■□ 3.28
PABPN1-201ENST00000216727 U3KPZ7 1027 aaPredicted RBP35.56■■■■□ 3.28
PABPN1-201ENST00000216727 ATP2B3Q16720 1220 aa35.56■■■■□ 3.28
PABPN1-201ENST00000216727 ZSCAN31Q96LW9 406 aaPredicted RBP35.56■■■■□ 3.28
PABPN1-201ENST00000216727 CNNM1Q9NRU3 951 aa35.56■■■■□ 3.28
PABPN1-201ENST00000216727 LRP5O75197 1615 aa35.55■■■■□ 3.28
PABPN1-201ENST00000216727 BRD1O95696 1058 aa35.55■■■■□ 3.28
PABPN1-201ENST00000216727 CHGBP05060 677 aa35.55■■■■□ 3.28
PABPN1-201ENST00000216727 ZMYM1Q5SVZ6 1142 aa35.55■■■■□ 3.28
PABPN1-201ENST00000216727 VGLL2Q8N8G2 317 aa35.55■■■■□ 3.28
PABPN1-201ENST00000216727 SEC62Q99442 399 aaKnown RBP35.55■■■■□ 3.28
PABPN1-201ENST00000216727 KRT32Q14532 448 aa35.54■■■■□ 3.28
PABPN1-201ENST00000216727 ALDH8A1Q9H2A2 487 aaPredicted RBP35.54■■■■□ 3.28
PABPN1-201ENST00000216727 SH2B1Q9NRF2 756 aaPredicted RBP35.54■■■■□ 3.28
PABPN1-201ENST00000216727 LRRFIP1Q32MZ4 808 aaKnown RBP35.53■■■■□ 3.28
PABPN1-201ENST00000216727 USP21Q9UK80 565 aa35.53■■■■□ 3.28
PABPN1-201ENST00000216727 RNF113AO15541 343 aaKnown RBP35.52■■■■□ 3.28
PABPN1-201ENST00000216727 HSP90B1P14625 803 aaKnown RBP35.52■■■■□ 3.28
PABPN1-201ENST00000216727 CCDC129Q6ZRS4 1044 aa35.52■■■■□ 3.28
PABPN1-201ENST00000216727 ZSCAN21Q9Y5A6 473 aaPredicted RBP35.52■■■■□ 3.28
PABPN1-201ENST00000216727 ZNF652Q9Y2D9 606 aa35.52■■■■□ 3.28
PABPN1-201ENST00000216727 BLOC1S2Q6QNY1 142 aa35.51■■■■□ 3.28
PABPN1-201ENST00000216727 ZNF512BQ96KM6 892 aaPredicted RBP35.51■■■■□ 3.28
PABPN1-201ENST00000216727 THSD7AQ9UPZ6 1657 aa35.51■■■■□ 3.27
PABPN1-201ENST00000216727 PDE8BO95263 885 aa35.5■■■■□ 3.27
PABPN1-201ENST00000216727 CLEC4GQ6UXB4 293 aa35.5■■■■□ 3.27
PABPN1-201ENST00000216727 BCORQ6W2J9 1755 aa35.5■■■■□ 3.27
PABPN1-201ENST00000216727 NIP7Q9Y221 180 aaKnown RBP eCLIP35.5■■■■□ 3.27
PABPN1-201ENST00000216727 FKBP4Q02790 459 aaKnown RBP eCLIP35.49■■■■□ 3.273e-10■■□□□ 11.7
PABPN1-201ENST00000216727 LINC00116Q8NCU8 138 aa35.49■■■■□ 3.27
PABPN1-201ENST00000216727 DSCC1Q9BVC3 393 aa35.49■■■■□ 3.27
PABPN1-201ENST00000216727 NTSR2O95665 410 aa35.49■■■■□ 3.27
PABPN1-201ENST00000216727 RPS6KB1P23443 525 aa35.49■■■■□ 3.27
PABPN1-201ENST00000216727 MROH5Q6ZUA9 1318 aa35.49■■■■□ 3.27
PABPN1-201ENST00000216727 CNTNAP4Q9C0A0 1308 aa35.48■■■■□ 3.27
PABPN1-201ENST00000216727 RGL2O15211 777 aa35.48■■■■□ 3.27
PABPN1-201ENST00000216727 HCLS1P14317 486 aaPredicted RBP35.48■■■■□ 3.27
PABPN1-201ENST00000216727 ANKRD1Q15327 319 aa35.48■■■■□ 3.27
PABPN1-201ENST00000216727 TAF6LQ9Y6J9 622 aa35.48■■■■□ 3.27
PABPN1-201ENST00000216727 RTL9Q8NET4 1388 aa35.47■■■■□ 3.27
PABPN1-201ENST00000216727 ZFYP08048 801 aaPredicted RBP35.47■■■■□ 3.27
PABPN1-201ENST00000216727 MCTP1Q6DN14 999 aa35.47■■■■□ 3.27
PABPN1-201ENST00000216727 LAMB2P55268 1798 aa35.47■■■■□ 3.27
PABPN1-201ENST00000216727 DDX60Q8IY21 1712 aaKnown RBP35.47■■■■□ 3.27
PABPN1-201ENST00000216727 GZF1Q9H116 711 aaPredicted RBP35.46■■■■□ 3.27
PABPN1-201ENST00000216727 LARP6Q9BRS8 491 aaKnown RBP35.45■■■■□ 3.27
PABPN1-201ENST00000216727 LARGE1O95461 756 aa35.45■■■■□ 3.27
PABPN1-201ENST00000216727 SCARF1Q14162 830 aa35.45■■■■□ 3.27
PABPN1-201ENST00000216727 MAST3O60307 1309 aa35.44■■■■□ 3.26
PABPN1-201ENST00000216727 WDR33Q9C0J8 1336 aaKnown RBP35.44■■■■□ 3.26
PABPN1-201ENST00000216727 CYP21A2P08686 494 aa35.44■■■■□ 3.26
PABPN1-201ENST00000216727 CCDC152Q4G0S7 254 aa35.44■■■■□ 3.26
PABPN1-201ENST00000216727 KLHL40Q2TBA0 621 aa35.43■■■■□ 3.26
PABPN1-201ENST00000216727 FAM177BA6PVY3 158 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 ZAP70P43403 619 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 PUM3Q15397 648 aaKnown RBP35.42■■■■□ 3.26
PABPN1-201ENST00000216727 SLFNL1Q499Z3 407 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 LMBRD1Q9NUN5 540 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 NHSQ6T4R5 1651 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 FGFR2P21802 821 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 ME3Q16798 604 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 LPIN2Q92539 896 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 NEK1Q96PY6 1258 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 SMC3Q9UQE7 1217 aa35.42■■■■□ 3.26
PABPN1-201ENST00000216727 COL9A3Q14050 684 aaPredicted RBP35.41■■■■□ 3.26
PABPN1-201ENST00000216727 RC3H1Q5TC82 1133 aaKnown RBP35.41■■■■□ 3.26
PABPN1-201ENST00000216727 TPCN1Q9ULQ1 816 aa35.41■■■■□ 3.26
PABPN1-201ENST00000216727 AKAP11Q9UKA4 1901 aa35.41■■■■□ 3.26
PABPN1-201ENST00000216727 HSPD1P10809 573 aaKnown RBP35.4■■■■□ 3.26
PABPN1-201ENST00000216727 MCAMP43121 646 aa35.4■■■■□ 3.26
PABPN1-201ENST00000216727 BTAF1O14981 1849 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 ARAP2Q8WZ64 1704 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 FSD2A1L4K1 749 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 CCDC83Q8IWF9 413 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 OSBP2Q969R2 916 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 PTF1AQ7RTS3 328 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 MPHOSPH8Q99549 860 aa35.39■■■■□ 3.26
PABPN1-201ENST00000216727 ARID4AP29374 1257 aaPredicted RBP35.38■■■■□ 3.25
PABPN1-201ENST00000216727 TOB2Q14106 344 aaPredicted RBP35.38■■■■□ 3.25
PABPN1-201ENST00000216727 L1TD1Q5T7N2 865 aaKnown RBP35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms