RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 BTAF1O14981 1849 aa20.91■□□□□ 0.94
VRK1-201ENST00000216639 ATRNO75882 1429 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 FAM177BA6PVY3 158 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 CCDC152Q4G0S7 254 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 RASEFQ8IZ41 740 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 NDUFB9Q9Y6M9 179 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 MROH5Q6ZUA9 1318 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 ONECUT3O60422 494 aaPredicted RBP20.9■□□□□ 0.94
VRK1-201ENST00000216639 NTSR2O95665 410 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 CREB3L3Q68CJ9 461 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 HELLSQ9NRZ9 838 aa20.9■□□□□ 0.94
VRK1-201ENST00000216639 HCLS1P14317 486 aaPredicted RBP20.89■□□□□ 0.93
VRK1-201ENST00000216639 PSMA5P28066 241 aa20.89■□□□□ 0.93
VRK1-201ENST00000216639 TNPO1Q92973 898 aaKnown RBP20.89■□□□□ 0.93
VRK1-201ENST00000216639 INTS4Q96HW7 963 aaKnown RBP20.89■□□□□ 0.93
VRK1-201ENST00000216639 HMG20BQ9P0W2 317 aa20.89■□□□□ 0.93
VRK1-201ENST00000216639 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
VRK1-201ENST00000216639 PDE8BO95263 885 aa20.88■□□□□ 0.93
VRK1-201ENST00000216639 CUL4AQ13619 759 aa20.88■□□□□ 0.93
VRK1-201ENST00000216639 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
VRK1-201ENST00000216639 RTL9Q8NET4 1388 aa20.88■□□□□ 0.93
VRK1-201ENST00000216639 TAF5LO75529 589 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 RPS6KA4O75676 772 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
VRK1-201ENST00000216639 ADORA1P30542 326 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 ZNF589Q86UQ0 364 aaPredicted RBP20.87■□□□□ 0.93
VRK1-201ENST00000216639 JAKMIP1Q96N16 626 aaKnown RBP20.87■□□□□ 0.93
VRK1-201ENST00000216639 MPHOSPH8Q99549 860 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 LRP5O75197 1615 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 LAMB2P55268 1798 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 FKBP4Q02790 459 aaKnown RBP eCLIP20.87■□□□□ 0.93
VRK1-201ENST00000216639 PTF1AQ7RTS3 328 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 TTC14Q96N46 770 aa20.87■□□□□ 0.93
VRK1-201ENST00000216639 SLC27A2O14975 620 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 PTMSP20962 102 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 SSFA2P28290 1259 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 SEPT12Q8IYM1 358 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 VGLL2Q8N8G2 317 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 ZSWIM6Q9HCJ5 1215 aa20.86■□□□□ 0.93
VRK1-201ENST00000216639 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
VRK1-201ENST00000216639 RNF113AO15541 343 aaKnown RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 IGHMBP2P38935 993 aaKnown RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 KCNQ4P56696 695 aa20.85■□□□□ 0.93
VRK1-201ENST00000216639 PUM3Q15397 648 aaKnown RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
VRK1-201ENST00000216639 NOL8Q76FK4 1167 aaKnown RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 ZNF512BQ96KM6 892 aaPredicted RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 DDX60Q8IY21 1712 aaKnown RBP20.85■□□□□ 0.93
VRK1-201ENST00000216639 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
VRK1-201ENST00000216639 DEKP35659 375 aaKnown RBP20.84■□□□□ 0.93
VRK1-201ENST00000216639 KRT32Q14532 448 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 ZMYM1Q5SVZ6 1142 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 FAM182BQ5T319 152 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 USPL1Q5W0Q7 1092 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 ZGPATQ8N5A5 531 aaKnown RBP20.84■□□□□ 0.93
VRK1-201ENST00000216639 PDRG1Q9NUG6 133 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 NARFQ9UHQ1 456 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 SCN7AQ01118 1682 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 ZPR1O75312 459 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 TSGA10IPQ3SY00 556 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 RUFY3Q7L099 469 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 LPIN2Q92539 896 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 LIMCH1Q9UPQ0 1083 aa20.84■□□□□ 0.93
VRK1-201ENST00000216639 RTCBQ9Y3I0 505 aaKnown RBP20.84■□□□□ 0.93
VRK1-201ENST00000216639 GNPATO15228 680 aa20.83■□□□□ 0.92
VRK1-201ENST00000216639 AK2P54819 239 aa20.83■□□□□ 0.92
VRK1-201ENST00000216639 NYXQ9GZU5 481 aa20.83■□□□□ 0.92
VRK1-201ENST00000216639 UQCRFS1P1P0C7P4 283 aa20.82■□□□□ 0.92
VRK1-201ENST00000216639 SLC5A1P13866 664 aa20.82■□□□□ 0.92
VRK1-201ENST00000216639 GSE1Q14687 1217 aa20.82■□□□□ 0.92
VRK1-201ENST00000216639 ADCK5Q3MIX3 580 aa20.82■□□□□ 0.92
VRK1-201ENST00000216639 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
VRK1-201ENST00000216639 QTRT2Q9H974 415 aaKnown RBP20.82■□□□□ 0.92
VRK1-201ENST00000216639 RPAP1Q9BWH6 1393 aaPredicted RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 LY75O60449 1722 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 GOLGA6L22H0YM25 854 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 GTF2E1P29083 439 aaPredicted RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 CLEC17AQ6ZS10 378 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 SEC62Q99442 399 aaKnown RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 CCDC129Q6ZRS4 1044 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
VRK1-201ENST00000216639 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.81■□□□□ 0.92
VRK1-201ENST00000216639 SEC31BQ9NQW1 1179 aa20.81■□□□□ 0.92
VRK1-201ENST00000216639 CYP2E1P05181 493 aaPredicted RBP20.8■□□□□ 0.92
VRK1-201ENST00000216639 ZAP70P43403 619 aa20.8■□□□□ 0.92
VRK1-201ENST00000216639 ANKRD1Q15327 319 aa20.8■□□□□ 0.92
VRK1-201ENST00000216639 ZSCAN25Q6NSZ9 544 aa20.8■□□□□ 0.92
VRK1-201ENST00000216639 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
VRK1-201ENST00000216639 FGFR2P21802 821 aa20.79■□□□□ 0.92
VRK1-201ENST00000216639 SF3B3Q15393 1217 aaKnown RBP20.79■□□□□ 0.92
VRK1-201ENST00000216639 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
VRK1-201ENST00000216639 SH2B1Q9NRF2 756 aaPredicted RBP20.79■□□□□ 0.92
VRK1-201ENST00000216639 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.79■□□□□ 0.92
VRK1-201ENST00000216639 SCARF1Q14162 830 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms